RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GALNT17Q6IS24 598 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 COA7Q96BR5 231 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 TRERF1Q96PN7 1200 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 BEGAINQ9BUH8 593 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 MOV10L1Q9BXT6 1211 aaKnown RBP14.36□□□□□ -0.11
SHMT2-221ENST00000555773 MROH8Q9H579 483 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
SHMT2-221ENST00000555773 CPA4Q9UI42 421 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 PTPRFP10586 1907 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 ESYT2A0FGR8 921 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 ALAS1P13196 640 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 CALML3P27482 149 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 GNA11P29992 359 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 SLC4A3P48751 1232 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
SHMT2-221ENST00000555773 NAPAP54920 295 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 USH1GQ495M9 461 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 CCAR1Q8IX12 1150 aaKnown RBP14.35□□□□□ -0.11
SHMT2-221ENST00000555773 GPKOWQ92917 476 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SHMT2-221ENST00000555773 C8orf76Q96K31 380 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
SHMT2-221ENST00000555773 SMCO2A6NFE2 343 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 DTNBO60941 627 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 TBC1D8O95759 1140 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 MAPK4P31152 587 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 NLRP5P59047 1200 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
SHMT2-221ENST00000555773 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
SHMT2-221ENST00000555773 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 BICD2Q8TD16 824 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 ACAD9Q9H845 621 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 RNF146Q9NTX7 359 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 VPS54Q9P1Q0 977 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
SHMT2-221ENST00000555773 BAZ2BQ9UIF8 2168 aaKnown RBP14.34□□□□□ -0.11
SHMT2-221ENST00000555773 STRNO43815 780 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 PEX10O60683 326 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 ERCC3P19447 782 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 GHRHRQ02643 423 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 NCAPG2Q86XI2 1143 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 CUL5Q93034 780 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 PHF20Q9BVI0 1012 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
SHMT2-221ENST00000555773 H3BQV1 296 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-221ENST00000555773 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 SYT1P21579 422 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 ADCY7P51828 1080 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
SHMT2-221ENST00000555773 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 KRT40Q6A162 431 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 R3HDMLQ9H3Y0 253 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 BRMS1Q9HCU9 246 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
SHMT2-221ENST00000555773 RLFQ13129 1914 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 OPLAHO14841 1288 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 MMP1P03956 469 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 FCER1AP12319 257 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 SP3Q02447 781 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 PORCNQ9H237 461 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 EFCC1Q9HA90 598 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 KCNJ14Q9UNX9 436 aa14.31□□□□□ -0.12
SHMT2-221ENST00000555773 GPR25O00155 361 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 NFIBO00712 420 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 MEIS2O14770 477 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 STX6O43752 255 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 CFBP00751 764 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-221ENST00000555773 HSD17B4P51659 736 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 KCTD2Q14681 263 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 KIF22Q14807 665 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 ARHGEF6Q15052 776 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 BLIDQ8IZY5 108 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 ANKRD35Q8N283 1001 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 FOXP1Q9H334 677 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-221ENST00000555773 GJB4Q9NTQ9 266 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 IVNS1ABPQ9Y6Y0 642 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 PFASO15067 1338 aa14.3□□□□□ -0.12
SHMT2-221ENST00000555773 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms