RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PCDHA11Q9Y5I1 949 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 ASTN1O14525 1302 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 EPOPA6NHQ4 379 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 F5H6K3 240 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 KLRC3Q07444 240 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 PPP2R2DQ66LE6 453 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 KRT40Q6A162 431 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
TDP1-212ENST00000555565 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
TDP1-212ENST00000555565 NOC4LQ9BVI4 516 aaKnown RBP12.87□□□□□ -0.35
TDP1-212ENST00000555565 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 HIPK3Q9H422 1215 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 CD320Q9NPF0 282 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
TDP1-212ENST00000555565 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
TDP1-212ENST00000555565 ATP2A1O14983 1001 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 FOXP2O15409 715 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
TDP1-212ENST00000555565 NDUFB10O96000 172 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 CCL23P55773 120 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 BEX3Q00994 111 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
TDP1-212ENST00000555565 CXCL17Q6UXB2 119 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 MKL1Q969V6 931 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 MTIF3Q9H2K0 278 aaKnown RBP12.86□□□□□ -0.35
TDP1-212ENST00000555565 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
TDP1-212ENST00000555565 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 PTGS1P23219 599 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 PPARAQ07869 468 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
TDP1-212ENST00000555565 ARMCX2Q7L311 632 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 NAPBQ9H115 298 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 TRPV6Q9H1D0 765 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 COG5Q9UP83 839 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 GNEQ9Y223 722 aaKnown RBP12.85□□□□□ -0.35
TDP1-212ENST00000555565 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 MUC6Q6W4X9 2439 aa12.85□□□□□ -0.35
TDP1-212ENST00000555565 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 B4GALT4O60513 344 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 TTLL1O95922 423 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 CA3P07451 260 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 PDE1AP54750 535 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 PDE4BQ07343 736 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 ITGA7Q13683 1181 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 TTLL4Q14679 1199 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 SKIV2LQ15477 1246 aaKnown RBP12.84□□□□□ -0.35
TDP1-212ENST00000555565 ALYREFQ86V81 257 aaKnown RBP12.84□□□□□ -0.35
TDP1-212ENST00000555565 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
TDP1-212ENST00000555565 NEDD1Q8NHV4 660 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 SCLYQ96I15 445 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
TDP1-212ENST00000555565 CERS4Q9HA82 394 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
TDP1-212ENST00000555565 SYNPO2Q9UMS6 1093 aa12.84□□□□□ -0.35
TDP1-212ENST00000555565 FAM86C2PA6NEL3 165 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 LPXNO60711 386 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 ATP2A2P16615 1042 aaKnown RBP12.83□□□□□ -0.36
TDP1-212ENST00000555565 TFAP4Q01664 338 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 TMEM63BQ5T3F8 832 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 RPUSD2Q8IZ73 545 aaKnown RBP12.83□□□□□ -0.36
TDP1-212ENST00000555565 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
TDP1-212ENST00000555565 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 EVI5LQ96CN4 794 aa12.83□□□□□ -0.36
TDP1-212ENST00000555565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
TDP1-212ENST00000555565 CABYRO75952 493 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
TDP1-212ENST00000555565 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 TNFAIP2Q03169 654 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 TAP1Q03518 808 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 SPRED2Q7Z698 418 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 HLA-CQ95604 372 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 SLC38A10Q9HBR0 1119 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
TDP1-212ENST00000555565 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
TDP1-212ENST00000555565 MCM3APO60318 1980 aa12.81□□□□□ -0.36
TDP1-212ENST00000555565 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
TDP1-212ENST00000555565 ZBED4O75132 1171 aa12.81□□□□□ -0.36
TDP1-212ENST00000555565 SMPD1P17405 629 aa12.81□□□□□ -0.36
TDP1-212ENST00000555565 PSMC6P62333 389 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms