RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LIPIQ6XZB0 460 aa8.21□□□□□ -1.1
VRK1-205ENST00000555402 LSRQ86X29 649 aaPredicted RBP8.21□□□□□ -1.1
VRK1-205ENST00000555402 TMEM52Q8NDY8 209 aa8.21□□□□□ -1.1
VRK1-205ENST00000555402 FBXO27Q8NI29 283 aa8.21□□□□□ -1.1
VRK1-205ENST00000555402 FNIP1Q8TF40 1166 aa8.21□□□□□ -1.1
VRK1-205ENST00000555402 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
VRK1-205ENST00000555402 EAF1Q96JC9 268 aaPredicted RBP8.21□□□□□ -1.1
VRK1-205ENST00000555402 ADAMTS1Q9UHI8 967 aa8.21□□□□□ -1.1
VRK1-205ENST00000555402 A0A1B0GTL3 188 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 MEIS1O00470 390 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 ZNF205O95201 554 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
VRK1-205ENST00000555402 FOXO4P98177 505 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
VRK1-205ENST00000555402 SNAP47Q5SQN1 464 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 GOLM1Q8NBJ4 401 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 JMJD8Q96S16 334 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 GMLQ99445 158 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
VRK1-205ENST00000555402 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
VRK1-205ENST00000555402 MSL3P1P0C860 447 aa8.19□□□□□ -1.1
VRK1-205ENST00000555402 POLR2BP30876 1174 aaKnown RBP8.19□□□□□ -1.1
VRK1-205ENST00000555402 BMP8BP34820 402 aa8.19□□□□□ -1.1
VRK1-205ENST00000555402 ZXDAP98168 799 aa8.19□□□□□ -1.1
VRK1-205ENST00000555402 MVKQ03426 396 aa8.19□□□□□ -1.1
VRK1-205ENST00000555402 GMIPQ9P107 970 aa8.19□□□□□ -1.1
VRK1-205ENST00000555402 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
VRK1-205ENST00000555402 VAV1P15498 845 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 ATF4P18848 351 aaPredicted RBP8.18□□□□□ -1.1
VRK1-205ENST00000555402 TNFRSF1AP19438 455 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 FBLN1P23142 703 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 CTSKP43235 329 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 FBXL19Q6PCT2 694 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 SAPCD2Q86UD0 394 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 ZNF512BQ96KM6 892 aaPredicted RBP8.18□□□□□ -1.1
VRK1-205ENST00000555402 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
VRK1-205ENST00000555402 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
VRK1-205ENST00000555402 SH3D21A4FU49 640 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 ADAM17P78536 824 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 CDCP2Q5VXM1 449 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 ZNF526Q8TF50 670 aaPredicted RBP8.17□□□□□ -1.1
VRK1-205ENST00000555402 SPATA32Q96LK8 384 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 PCDHB14Q9Y5E9 798 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
VRK1-205ENST00000555402 A0A1W2PQ27 194 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 A0A1W2PQ64 194 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 A0A1W2PQC6 194 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 A0A1W2PQD8 194 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 SUV39H1O43463 412 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 CLEC3AO75596 197 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 ATF2P15336 505 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 GARTP22102 1010 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 HTRA3P83110 453 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 FAM196AQ6ZSG2 479 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 NT5C1AQ9BXI3 368 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 GFOD1Q9NXC2 390 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 PMF1-BGLAPU3KQ54 211 aa8.16□□□□□ -1.1
VRK1-205ENST00000555402 TLR3O15455 904 aaKnown RBP8.15□□□□□ -1.1
VRK1-205ENST00000555402 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
VRK1-205ENST00000555402 ATE1O95260 518 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
VRK1-205ENST00000555402 APOBRQ0VD83 1088 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 OVOS1Q6IE37 1185 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 CNNM2Q9H8M5 875 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 HCFC2Q9Y5Z7 792 aa8.15□□□□□ -1.1
VRK1-205ENST00000555402 MATN3O15232 486 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 CYBBP04839 570 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 ITGB3P05106 788 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 DBHP09172 617 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 NASPP49321 788 aaPredicted RBP8.14□□□□□ -1.11
VRK1-205ENST00000555402 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
VRK1-205ENST00000555402 DDX1Q92499 740 aaKnown RBP8.14□□□□□ -1.11
VRK1-205ENST00000555402 ARMC5Q96C12 935 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 SMPD4Q9NXE4 827 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 FBXL21Q9UKT6 434 aa8.14□□□□□ -1.11
VRK1-205ENST00000555402 SRGAP3O43295 1099 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 NOBOXO60393 691 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 GREM1O60565 184 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 FGRP09769 529 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 CNR2P34972 360 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 CCNFP41002 786 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 RTP2Q5QGT7 225 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 CPLX3Q8WVH0 158 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 NKD1Q969G9 470 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 ATG4CQ96DT6 458 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 KCNQ5Q9NR82 932 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 PCDHB12Q9Y5F1 795 aa8.13□□□□□ -1.11
VRK1-205ENST00000555402 ROBO2Q9HCK4 1378 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms