RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PLA2G6O60733 806 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 DTNBO60941 627 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 MYCP01106 439 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-213ENST00000555386 MAPK4P31152 587 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 METAP2P50579 478 aaKnown RBP eCLIP11.4□□□□□ -0.58
PSEN1-213ENST00000555386 AK2P54819 239 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 PRKCZQ05513 592 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 MCTP1Q6DN14 999 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 PIGSQ96S52 555 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 RANBP17Q9H2T7 1088 aaKnown RBP11.4□□□□□ -0.58
PSEN1-213ENST00000555386 NCOA5Q9HCD5 579 aaKnown RBP11.4□□□□□ -0.58
PSEN1-213ENST00000555386 LMBRD1Q9NUN5 540 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 ZDHHC9Q9Y397 364 aa11.4□□□□□ -0.58
PSEN1-213ENST00000555386 ZNF536O15090 1300 aa11.4□□□□□ -0.59
PSEN1-213ENST00000555386 BRCA2P51587 3418 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 CYP2B6P20813 491 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 HOXD10P28358 340 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 CDC27P30260 824 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
PSEN1-213ENST00000555386 FLT3LGP49771 235 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 QRICH1Q2TAL8 776 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 RIOX2Q8IUF8 465 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
PSEN1-213ENST00000555386 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 MMP19Q99542 508 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 RNF146Q9NTX7 359 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 PTCH2Q9Y6C5 1203 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 PLXNA1Q9UIW2 1896 aa11.39□□□□□ -0.59
PSEN1-213ENST00000555386 CYTH3O43739 400 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 SLC25A27O95847 323 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PGK2P07205 417 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 FDX1P10109 184 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 FCER1AP12319 257 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PDIA3P30101 505 aaKnown RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 GNAQP50148 359 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ZNF445P59923 1031 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PKP1Q13835 747 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 NSMFQ6X4W1 530 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 FBXO11Q86XK2 927 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MROH8Q9H579 483 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 HPS5Q9UPZ3 1129 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MCM3APO60318 1980 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MBD3O95983 291 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ICAM1P05362 532 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ELNP15502 786 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PTPREP23469 700 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ADORA2AP29274 412 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 KCTD2Q14681 263 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 TMTC3Q6ZXV5 915 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 DPP9Q86TI2 863 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 NECAB1Q8N987 351 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 SH3TC2Q8TF17 1288 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 RRP36Q96EU6 259 aaKnown RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 DDX11Q96FC9 970 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 SEC63Q9UGP8 760 aaKnown RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 PTPN22Q9Y2R2 807 aa11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-213ENST00000555386 ZBTB5O15062 677 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 PPP1R11O60927 126 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-213ENST00000555386 OAZ1P54368 228 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 SHCBP1Q8NEM2 672 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 PHKBQ93100 1093 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 LZTS2Q9BRK4 669 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 RIOX1Q9H6W3 641 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 ACAD9Q9H845 621 aa11.37□□□□□ -0.59
PSEN1-213ENST00000555386 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-213ENST00000555386 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-213ENST00000555386 PNMA6FA0A0J9YX94 578 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 CCDC196A0A1B0GTZ2 297 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 PTPDC1A2A3K4 754 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 NFIBO00712 420 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 CPLX1O14810 134 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 ATP2A1O14983 1001 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 ADCY3O60266 1144 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 COBLO75128 1261 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 LARGE1O95461 756 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 GNRH1P01148 92 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 CALML3P27482 149 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 COPB2P35606 906 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms