RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CYP46A1Q9Y6A2 500 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 PFASO15067 1338 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 RBBP6Q7Z6E9 1792 aaKnown RBP23.82■■□□□ 1.4
FOXN3-209ENST00000555353 ZNF792Q3KQV3 632 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 OLFML2BQ68BL8 750 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 APOA5Q6Q788 366 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 RUFY3Q7L099 469 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 RAB11FIP4Q86YS3 637 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 CCDC144CPQ8IYA2 1237 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 MAML3Q96JK9 1138 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 UNC93B1Q9H1C4 597 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 A1CFQ9NQ94 594 aaKnown RBP23.82■■□□□ 1.4
FOXN3-209ENST00000555353 BRCA2P51587 3418 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 NSMFQ6X4W1 530 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 FBXO11Q86XK2 927 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 HOMER1Q86YM7 354 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 FANCBQ8NB91 859 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 LZTS2Q9BRK4 669 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 ZSWIM6Q9HCJ5 1215 aa23.81■■□□□ 1.4
FOXN3-209ENST00000555353 HMX1Q9NP08 348 aaPredicted RBP23.81■■□□□ 1.4
FOXN3-209ENST00000555353 NAP1L2Q9ULW6 460 aaPredicted RBP23.81■■□□□ 1.4
FOXN3-209ENST00000555353 DNAJC25-GNG10A0A024R161 153 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 KLF18A0A0U1RQI7 1052 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 ZBTB5O15062 677 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 ZBTB43O43298 467 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 RIOX1Q9H6W3 641 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 BRPF3Q9ULD4 1205 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 RPTORQ8N122 1335 aa23.8■■□□□ 1.4
FOXN3-209ENST00000555353 ST18O60284 1047 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 CYP2C19P33261 490 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 CACNB2Q08289 660 aaPredicted RBP23.79■■□□□ 1.4
FOXN3-209ENST00000555353 MAP3K21Q5TCX8 1036 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 BRF1Q92994 677 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 MTMR8Q96EF0 704 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 AMNQ9BXJ7 453 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 ABCB11O95342 1321 aa23.79■■□□□ 1.4
FOXN3-209ENST00000555353 POTEB2H3BUK9 544 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 NFIBO00712 420 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 CYTH3O43739 400 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 NEK4P51957 841 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 FBXL16Q8N461 479 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 PIGSQ96S52 555 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 SPZ1Q9BXG8 430 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 UPF3BQ9BZI7 483 aaKnown RBP23.78■■□□□ 1.4
FOXN3-209ENST00000555353 CYP39A1Q9NYL5 469 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 POTEFA5A3E0 1075 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 GJB1P08034 283 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 SMARCA1P28370 1054 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 APOBRQ0VD83 1088 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 TRAF1Q13077 416 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 SLC35G1Q2M3R5 365 aa23.78■■□□□ 1.4
FOXN3-209ENST00000555353 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.78■■□□□ 1.41e-5■■■□□ 18
FOXN3-209ENST00000555353 RBM28Q9NW13 759 aaKnown RBP23.78■■□□□ 1.4
FOXN3-209ENST00000555353 PTPDC1A2A3K4 754 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 PLEKHA8P1O95397 391 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 RCAN1P53805 252 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 RTN1Q16799 776 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 CLEC4DQ8WXI8 215 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 PIBF1Q8WXW3 757 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 RRP36Q96EU6 259 aaKnown RBP23.77■■□□□ 1.4
FOXN3-209ENST00000555353 TINF2Q9BSI4 451 aa23.77■■□□□ 1.4
FOXN3-209ENST00000555353 PAK6Q9NQU5 681 aaPredicted RBP23.77■■□□□ 1.4
FOXN3-209ENST00000555353 MRPL11Q9Y3B7 192 aaKnown RBP23.77■■□□□ 1.4
FOXN3-209ENST00000555353 PNMA6FA0A0J9YX94 578 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 GOLGA8AA7E2F4 631 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 GOLGA8BA8MQT2 603 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 IGHA2P01877 340 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 RNF207Q6ZRF8 634 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 ZNF467Q7Z7K2 595 aaPredicted RBP23.76■■□□□ 1.39
FOXN3-209ENST00000555353 FAM133AQ8N9E0 248 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 DEFB118Q96PH6 123 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 AGXT2Q9BYV1 514 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 PDRG1Q9NUG6 133 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 SEC63Q9UGP8 760 aaKnown RBP23.76■■□□□ 1.39
FOXN3-209ENST00000555353 PCDHA1Q9Y5I3 950 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 MCM3APO60318 1980 aa23.76■■□□□ 1.39
FOXN3-209ENST00000555353 ANP32AP39687 249 aaKnown RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 CNTN2Q02246 1040 aa23.75■■□□□ 1.39
FOXN3-209ENST00000555353 BAATQ14032 418 aaPredicted RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 TMTC3Q6ZXV5 915 aa23.75■■□□□ 1.39
FOXN3-209ENST00000555353 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 SRBD1Q8N5C6 995 aaKnown RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 MSL3Q8N5Y2 521 aaKnown RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
FOXN3-209ENST00000555353 CNGA1P29973 690 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 CCND3P30281 292 aaPredicted RBP23.74■■□□□ 1.39
FOXN3-209ENST00000555353 METAP2P50579 478 aaKnown RBP eCLIP23.74■■□□□ 1.39
FOXN3-209ENST00000555353 MCF2L2Q86YR7 1114 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 CCDC82Q8N4S0 544 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 SYNGAP1Q96PV0 1343 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 PPP1R11O60927 126 aaPredicted RBP23.74■■□□□ 1.39
FOXN3-209ENST00000555353 CALML3P27482 149 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 GJA8P48165 433 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 PPP2R5BQ15173 497 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 MAMDC4Q6UXC1 1216 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 U2AF1L4Q8WU68 220 aaKnown RBP23.74■■□□□ 1.39
FOXN3-209ENST00000555353 CNPY2Q9Y2B0 182 aa23.74■■□□□ 1.39
FOXN3-209ENST00000555353 LCTP09848 1927 aa23.73■■□□□ 1.39
FOXN3-209ENST00000555353 CCDC196A0A1B0GTZ2 297 aa23.73■■□□□ 1.39
FOXN3-209ENST00000555353 CYBAP13498 195 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms