RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 K7ELQ4 463 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-219ENST00000555323 ALAS1P13196 640 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 SCG2P13521 617 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 FDPSP14324 419 aaKnown RBP14.65□□□□□ -0.06
SYNE2-219ENST00000555323 PTPREP23469 700 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 PSMC4P43686 418 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 FCGRTP55899 365 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 CAP1Q01518 475 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
SYNE2-219ENST00000555323 GHRHRQ02643 423 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 KIF22Q14807 665 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 ARHGEF6Q15052 776 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 TEX2Q8IWB9 1127 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 FAM177A1Q8N128 213 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-219ENST00000555323 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 BARHL2Q9NY43 387 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 MAP3K20Q9NYL2 800 aaKnown RBP14.65□□□□□ -0.06
SYNE2-219ENST00000555323 GJD2Q9UKL4 321 aa14.65□□□□□ -0.06
SYNE2-219ENST00000555323 hCG_1642624A0A1W2PR95 340 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 USH1GQ495M9 461 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 MUM1L1Q5H9M0 696 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 MORN1Q5T089 497 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 PLEKHH3Q7Z736 793 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 CCAR1Q8IX12 1150 aaKnown RBP14.64□□□□□ -0.07
SYNE2-219ENST00000555323 PIBF1Q8WXW3 757 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 USP6NLQ92738 828 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 COA7Q96BR5 231 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 ARHGAP39Q9C0H5 1083 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
SYNE2-219ENST00000555323 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-219ENST00000555323 DNAJC25-GNG10A0A024R161 153 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 PTPDC1A2A3K4 754 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 SLC15A5A6NIM6 579 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 STXBP3O00186 592 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 OPLAHO14841 1288 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 JAK2O60674 1132 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 FCER1AP12319 257 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 HOXD10P28358 340 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 LBX1P52954 281 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 HMGN5P82970 282 aaKnown RBP14.63□□□□□ -0.07
SYNE2-219ENST00000555323 GRB14Q14449 540 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 WWC2Q6AWC2 1192 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 TYW1BQ6NUM6 668 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 MCF2L2Q86YR7 1114 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 CD99L2Q8TCZ2 262 aa14.63□□□□□ -0.07
SYNE2-219ENST00000555323 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
SYNE2-219ENST00000555323 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-219ENST00000555323 ESYT2A0FGR8 921 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 PIK3CDO00329 1044 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 NFIBO00712 420 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 TNPO2O14787 897 aaKnown RBP14.62□□□□□ -0.07
SYNE2-219ENST00000555323 PPFIA3O75145 1194 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 HOXC6P09630 235 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-219ENST00000555323 SLC4A3P48751 1232 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 PRMT2P55345 433 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 KCTD2Q14681 263 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 PPP1R18Q6NYC8 613 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 HEATR3Q7Z4Q2 680 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 WASF1Q92558 559 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 MMP19Q99542 508 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 ZMYND12Q9H0C1 365 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 A1CFQ9NQ94 594 aaKnown RBP14.62□□□□□ -0.07
SYNE2-219ENST00000555323 PRDM10Q9NQV6 1147 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 HOMER2Q9NSB8 354 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-219ENST00000555323 IVNS1ABPQ9Y6Y0 642 aa14.62□□□□□ -0.07
SYNE2-219ENST00000555323 SMCHD1A6NHR9 2005 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 XRCC5P13010 732 aaKnown RBP14.61□□□□□ -0.07
SYNE2-219ENST00000555323 ANKRD35Q8N283 1001 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 CCDC12Q8WUD4 166 aaPredicted RBP14.61□□□□□ -0.07
SYNE2-219ENST00000555323 TBC1D5Q92609 795 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 GPKOWQ92917 476 aaPredicted RBP eCLIP14.61□□□□□ -0.07
SYNE2-219ENST00000555323 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 CYP39A1Q9NYL5 469 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 DIS3Q9Y2L1 958 aaKnown RBP14.61□□□□□ -0.07
SYNE2-219ENST00000555323 PFASO15067 1338 aa14.61□□□□□ -0.07
SYNE2-219ENST00000555323 MEIS2O14770 477 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 ADORA2AP29274 412 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 HSD17B4P51659 736 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 NAPAP54920 295 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
SYNE2-219ENST00000555323 MAP2K5Q13163 448 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 IRF5Q13568 498 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 BAATQ14032 418 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-219ENST00000555323 ZNF792Q3KQV3 632 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 RNF207Q6ZRF8 634 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 OTOP1Q7RTM1 612 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 FAM133AQ8N9E0 248 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 SHISA4Q96DD7 197 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 DDX11Q96FC9 970 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 AIFM3Q96NN9 605 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 GLT8D2Q9H1C3 349 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms