RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 NKD1Q969G9 470 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 CCDC86Q9H6F5 360 aaKnown RBP5.42□□□□□ -1.54
CPSF2-204ENST00000555244 CYP4F12Q9HCS2 524 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 KCNK4Q9NYG8 393 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 PCDHA4Q9UN74 947 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 USP16Q9Y5T5 823 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 C4AP0C0L4 1744 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 NRXN2Q9P2S2 1712 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 SYNGAP1Q96PV0 1343 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 COL15A1P39059 1388 aa5.42□□□□□ -1.54
CPSF2-204ENST00000555244 CHD4Q14839 1912 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 PXDNLA1KZ92 1463 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 KIAA1551Q9HCM1 1747 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 MEGF11A6BM72 1044 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 ECEL1O95672 775 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 F13A1P00488 732 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 NEFMP07197 916 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 LIG1P18858 919 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 GARTP22102 1010 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 TMPOP42166 694 aaKnown RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 EIF4A1P60842 406 aaKnown RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 RPL6Q02878 288 aaKnown RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 ARID5AQ03989 594 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 NFIXQ14938 502 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 KIF4BQ2VIQ3 1234 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 BNC2Q6ZN30 1099 aaPredicted RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 HDXQ7Z353 690 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 TMEM130Q8N3G9 435 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 RASGRP4Q8TDF6 673 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 UBASH3BQ8TF42 649 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 GAL3ST3Q96A11 431 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 LRRC3Q9BY71 257 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 CACNA2D2Q9NY47 1150 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 SRP68Q9UHB9 627 aaKnown RBP5.41□□□□□ -1.54
CPSF2-204ENST00000555244 SNCAIPQ9Y6H5 919 aa5.41□□□□□ -1.54
CPSF2-204ENST00000555244 FAM221AA4D161 298 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 KLRG2A4D1S0 409 aaPredicted RBP5.4□□□□□ -1.54
CPSF2-204ENST00000555244 CHL1O00533 1208 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 ZNF862O60290 1169 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 AOC2O75106 756 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 CILPO75339 1184 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 CAMTA2O94983 1202 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 A1BGP04217 495 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 CTSBP07858 339 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 DNAJA1P31689 397 aaKnown RBP5.4□□□□□ -1.54
CPSF2-204ENST00000555244 LMOD3Q0VAK6 560 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 CNGB1Q14028 1251 aaPredicted RBP5.4□□□□□ -1.54
CPSF2-204ENST00000555244 DCTN1Q14203 1278 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 GPR162Q16538 588 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 FDX2Q6P4F2 183 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 LRP10Q7Z4F1 713 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 SREK1Q8WXA9 508 aaKnown RBP5.4□□□□□ -1.54
CPSF2-204ENST00000555244 RUNDC1Q96C34 613 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 MEGF10Q96KG7 1140 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 DRC1Q96MC2 740 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 TMPRSS13Q9BYE2 586 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 AKTIPQ9H8T0 292 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 UBP1Q9NZI7 540 aa5.4□□□□□ -1.54
CPSF2-204ENST00000555244 ADCY9O60503 1353 aa5.4□□□□□ -1.55
CPSF2-204ENST00000555244 KDM3BQ7LBC6 1761 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 DLG5Q8TDM6 1919 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ERVV-1B6SEH8 477 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 TLR3O15455 904 aaKnown RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 WISP1O95388 367 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 DLGAP3O95886 979 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 H2AFB1P0C5Y9 115 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ZNF853P0CG23 659 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ATF4P18848 351 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 CANXP27824 592 aaKnown RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 MCM4P33991 863 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ZNF165P49910 485 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 RIPK4P57078 832 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ID3Q02535 119 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 PTPN11Q06124 597 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ANKRD34AQ69YU3 496 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 KIAA1211Q6ZU35 1233 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 REC114Q7Z4M0 266 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 SLITRK4Q8IW52 837 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 AGGF1Q8N302 714 aaeCLIP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 SMG8Q8ND04 991 aaKnown RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 GMLQ99445 158 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 WDR18Q9BV38 432 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 SSBP4Q9BWG4 385 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 BRIP1Q9BX63 1249 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 TANGO6Q9C0B7 1094 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 SUGCTQ9HAC7 445 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 PICK1Q9NRD5 415 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 MAPK8IP3Q9UPT6 1336 aa5.39□□□□□ -1.55
CPSF2-204ENST00000555244 BRCA1P38398 1863 aaKnown RBP5.39□□□□□ -1.55
CPSF2-204ENST00000555244 A0A0G2JLW4 131 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 F8W735 103 aaPredicted RBP5.38□□□□□ -1.55
CPSF2-204ENST00000555244 SART1O43290 800 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms