RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RANBP17Q9H2T7 1088 aaKnown RBP10.13□□□□□ -0.79
TDP1-210ENST00000554976 VEZTQ9HBM0 779 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 CNOT7Q9UIV1 285 aaKnown RBP10.13□□□□□ -0.79
TDP1-210ENST00000554976 HACL1Q9UJ83 578 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 MAN1B1Q9UKM7 699 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 LRRC37A2A6NM11 1700 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 VWA3AA6NCI4 1184 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 BMP3P12645 472 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CLCN1P35523 988 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CCDC96Q2M329 555 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 PPP4R3AQ6IN85 833 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 PAGE5Q96GU1 130 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 MED15Q96RN5 788 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 TRIM34Q9BYJ4 488 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 PCDHA5Q9Y5H7 936 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 MYO1BO43795 1136 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 SLC37A4O43826 429 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 GRAMD1CQ8IYS0 662 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CNNM3Q8NE01 707 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 SDF4Q9BRK5 362 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 MMTAG2Q9BU76 263 aaKnown RBP10.12□□□□□ -0.79
TDP1-210ENST00000554976 CCSER1Q9C0I3 900 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 GINM1Q9NU53 330 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 SCN4AP35499 1836 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CYP3A7-CYP3A51PA0A087WV96 503 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CYP3A7P24462 503 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 CDC25BP30305 580 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 UBE2SQ16763 222 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 KIF4BQ2VIQ3 1234 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 MIGA2Q7L4E1 593 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 POTEDQ86YR6 584 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 TRPM4Q8TD43 1214 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 GPRC5DQ9NZD1 345 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
TDP1-210ENST00000554976 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
TDP1-210ENST00000554976 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 GPC2Q8N158 579 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 CUL5Q93034 780 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 SCAF8Q9UPN6 1271 aaKnown RBP10.11□□□□□ -0.79
TDP1-210ENST00000554976 IKBKBO14920 756 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 OR52Z1P0C646 297 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 TNNI2P48788 182 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
TDP1-210ENST00000554976 GHRHRQ02643 423 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 JAKMIP3Q5VZ66 844 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 TEX2Q8IWB9 1127 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 TRIML1Q8N9V2 468 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
TDP1-210ENST00000554976 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
TDP1-210ENST00000554976 TMEM232C9JQI7 657 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 CCNT1O60563 726 aaKnown RBP10.1□□□□□ -0.79
TDP1-210ENST00000554976 TDP2O95551 362 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 LMNB1P20700 586 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 ZNF75DP51815 510 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 TBC1D10BQ4KMP7 808 aaPredicted RBP10.1□□□□□ -0.79
TDP1-210ENST00000554976 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 HAS1Q92839 578 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
TDP1-210ENST00000554976 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 ZNF536O15090 1300 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 PP2D1A8MPX8 630 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 NEMFO60524 1076 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 TAL1P17542 331 aaPredicted RBP10.1□□□□□ -0.79
TDP1-210ENST00000554976 TNFAIP1Q13829 316 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 MOXD1Q6UVY6 613 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 AK8Q96MA6 479 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 KCNMB3Q9NPA1 279 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 LOXHD1Q8IVV2 1947 aa10.1□□□□□ -0.79
TDP1-210ENST00000554976 CTNND1O60716 968 aaKnown RBP10.09□□□□□ -0.79
TDP1-210ENST00000554976 YBX3P16989 372 aaKnown RBP eCLIP10.09□□□□□ -0.79
TDP1-210ENST00000554976 SNAP25P60880 206 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 AP3B2Q13367 1082 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.09□□□□□ -0.79
TDP1-210ENST00000554976 AOPEPQ8N6M6 819 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 LENG9Q96B70 501 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 DHX58Q96C10 678 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 WDR81Q562E7 1941 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 ASNSP08243 561 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 STAT2P52630 851 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 LETM2Q2VYF4 491 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 GLT8D2Q9H1C3 349 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 PSTPIP2Q9H939 334 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 KBTBD4Q9NVX7 518 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 PITPNM2Q9BZ72 1349 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.09□□□□□ -0.79
TDP1-210ENST00000554976 BIN1O00499 593 aa10.09□□□□□ -0.79
TDP1-210ENST00000554976 KLRC4O43908 158 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms