RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 RPUSD2Q8IZ73 545 aaKnown RBP11.48□□□□□ -0.57
TMEM253-204ENST00000554844 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
TMEM253-204ENST00000554844 MKL1Q969V6 931 aa11.48□□□□□ -0.57
TMEM253-204ENST00000554844 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
TMEM253-204ENST00000554844 MTMR4Q9NYA4 1195 aa11.48□□□□□ -0.57
TMEM253-204ENST00000554844 MCM3APO60318 1980 aa11.48□□□□□ -0.57
TMEM253-204ENST00000554844 PRUNE2Q8WUY3 3088 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 ZBBXA8MT70 800 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 SMARCA5O60264 1052 aaPredicted RBP11.47□□□□□ -0.57
TMEM253-204ENST00000554844 ALAS1P13196 640 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 CYP2C18P33260 490 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 PBX2P40425 430 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 ITGA7Q13683 1181 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
TMEM253-204ENST00000554844 FSCN1Q16658 493 aaKnown RBP11.47□□□□□ -0.57
TMEM253-204ENST00000554844 CXCL17Q6UXB2 119 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 OSBP2Q969R2 916 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 NAPBQ9H115 298 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
TMEM253-204ENST00000554844 VCANP13611 3396 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 MYO9BQ13459 2157 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 IGKV6D-41A0A0C4DH26 115 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
TMEM253-204ENST00000554844 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
TMEM253-204ENST00000554844 ADCY6O43306 1168 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 COL9A1P20849 921 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
TMEM253-204ENST00000554844 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 C16orf59Q7L2K0 433 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 MICALL1Q8N3F8 863 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 ADAMTS19Q8TE59 1207 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 STAG1Q8WVM7 1258 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 ASB2Q96Q27 587 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 A1CFQ9NQ94 594 aaKnown RBP11.46□□□□□ -0.57
TMEM253-204ENST00000554844 SLC4A7Q9Y6M7 1214 aa11.46□□□□□ -0.57
TMEM253-204ENST00000554844 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 ERC2O15083 957 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 CD4P01730 458 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 SUPT20HL2P0C7V6 817 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 NUBP1P53384 320 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 CCL23P55773 120 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 NKX3-2P78367 333 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 TFAP4Q01664 338 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 AAK1Q2M2I8 961 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 IQSEC1Q6DN90 963 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 GMCL1Q96IK5 515 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 FGD4Q96M96 766 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 UHRF1Q96T88 793 aaPredicted RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 EPB41L4AQ9HCS5 686 aaPredicted RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
TMEM253-204ENST00000554844 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
TMEM253-204ENST00000554844 RAD50Q92878 1312 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 M0R2C6 588 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
TMEM253-204ENST00000554844 PFKMP08237 780 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 ACTN1P12814 892 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 MCCP23508 829 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 PPARAQ07869 468 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
TMEM253-204ENST00000554844 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
TMEM253-204ENST00000554844 SLC43A3Q8NBI5 491 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 CHMP4CQ96CF2 233 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 FSD1Q9BTV5 496 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 KATNBL1Q9H079 304 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 VTA1Q9NP79 307 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
TMEM253-204ENST00000554844 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 GNEQ9Y223 722 aaKnown RBP11.44□□□□□ -0.58
TMEM253-204ENST00000554844 Q9Y3F1 56 aa11.44□□□□□ -0.58
TMEM253-204ENST00000554844 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 B4GALT4O60513 344 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 PLA2G6O60733 806 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
TMEM253-204ENST00000554844 SMPD1P17405 629 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 CPT1AP50416 773 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
TMEM253-204ENST00000554844 CXXC1Q9P0U4 656 aaPredicted RBP11.43□□□□□ -0.58
TMEM253-204ENST00000554844 RCAN3Q9UKA8 241 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms