RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PAMP19021 973 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 HOXC12P31275 282 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 HSF5Q4G112 596 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-214ENST00000554819 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 NLRX1Q86UT6 975 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 ZNF227Q86WZ6 799 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 SGSM3Q96HU1 749 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 RNF32Q9H0A6 362 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 NKX2-4Q9H2Z4 354 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 YBX2Q9Y2T7 364 aaKnown RBP6.2□□□□□ -1.42
SCFD1-214ENST00000554819 MSRB2Q9Y3D2 182 aa6.2□□□□□ -1.42
SCFD1-214ENST00000554819 LRRC10BA6NIK2 292 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 NOTOA8MTQ0 251 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 PDPK1O15530 556 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 CPP00450 1065 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 PNLIPP16233 465 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 L1CAMP32004 1257 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 ARL4AP40617 200 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 SCRN1Q12765 414 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 LAPTM5Q13571 262 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-214ENST00000554819 LRP10Q7Z4F1 713 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 UBXN4Q92575 508 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 COPS5Q92905 334 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
SCFD1-214ENST00000554819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-214ENST00000554819 NPHP3-ACAD11A0A0J9YXS1 232 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 PRKCAP17252 672 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 CORO7P57737 925 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 RASGRF1Q13972 1273 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 IQCEQ6IPM2 695 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 IRF2BP1Q8IU81 584 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 LRRC47Q8N1G4 583 aaKnown RBP6.18□□□□□ -1.42
SCFD1-214ENST00000554819 NLGN2Q8NFZ4 835 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 PMFBP1Q8TBY8 1022 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 BTN2A2Q8WVV5 523 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 MKL1Q969V6 931 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 SHISA4Q96DD7 197 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-214ENST00000554819 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
SCFD1-214ENST00000554819 FMNL2Q96PY5 1086 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 LGR4Q9BXB1 951 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 ACSL6Q9UKU0 697 aa6.18□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQU0 124 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 CCDC85CA6NKD9 419 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-214ENST00000554819 SNRPB2P08579 225 aaKnown RBP6.17□□□□□ -1.42
SCFD1-214ENST00000554819 TXKP42681 527 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 CEBPAP49715 358 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-214ENST00000554819 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 CYP4F8P98187 520 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 SERINC3Q13530 473 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 MLANAQ16655 118 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 SIRT2Q8IXJ6 389 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 NUP43Q8NFH3 380 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 IMPACTQ9P2X3 320 aa6.17□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQJ5 194 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 TBX1O43435 398 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 SCG5P05408 212 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 THBDP07204 575 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 PLS3P13797 630 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 PDE6BP35913 854 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 KCNJ6P48051 423 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 IFRD2Q12894 506 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-214ENST00000554819 MTERF2Q49AM1 385 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-214ENST00000554819 MMP19Q99542 508 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 DNAJC2Q99543 621 aaKnown RBP6.16□□□□□ -1.42
SCFD1-214ENST00000554819 GPRC5CQ9NQ84 441 aa6.16□□□□□ -1.42
SCFD1-214ENST00000554819 OR14I1A6ND48 311 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 FARP2O94887 1054 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-214ENST00000554819 CAPNS1P04632 268 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 MPOP05164 745 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 ECI1P42126 302 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 GALK1P51570 392 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 MVKQ03426 396 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 PRR23BQ6ZRT6 265 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 CPNE8Q86YQ8 564 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 KCTD13Q8WZ19 329 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 DEPDC7Q96QD5 511 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 AARSD1Q9BTE6 412 aaKnown RBP6.15□□□□□ -1.42
SCFD1-214ENST00000554819 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
SCFD1-214ENST00000554819 DCP1AQ9NPI6 582 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-214ENST00000554819 PDLIM7Q9NR12 457 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCFD1-214ENST00000554819 CLEC1BQ9P126 229 aa6.15□□□□□ -1.42
SCFD1-214ENST00000554819 TRAV20A0A0B4J274 112 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 ABLIM1O14639 778 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 NPHS1O60500 1241 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 GFRA1P56159 465 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 ERVFRD-1P60508 538 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 TMEM62Q0P6H9 643 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 NFE2L2Q16236 605 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 ADGRF1Q5T601 910 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 FRS2Q8WU20 508 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 SRPK1Q96SB4 655 aaKnown RBP6.14□□□□□ -1.43
SCFD1-214ENST00000554819 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms