RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 SLC15A5A6NIM6 579 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 ZBTB43O43298 467 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 ICAM1P05362 532 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
RIPK3-204ENST00000554756 COPB2P35606 906 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
RIPK3-204ENST00000554756 NOL8Q76FK4 1167 aaKnown RBP14.03□□□□□ -0.16
RIPK3-204ENST00000554756 FANCBQ8NB91 859 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 MMP19Q99542 508 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 MAP3K14Q99558 947 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 RNF146Q9NTX7 359 aa14.03□□□□□ -0.16
RIPK3-204ENST00000554756 GOLGA8AA7E2F4 631 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 GOLGA8BA8MQT2 603 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 FCER1AP12319 257 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 CSPP1Q1MSJ5 1256 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 QRICH1Q2TAL8 776 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 USH1GQ495M9 461 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 MUM1L1Q5H9M0 696 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 HOMER1Q86YM7 354 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 SYAP1Q96A49 352 aaPredicted RBP14.02□□□□□ -0.16
RIPK3-204ENST00000554756 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 HPS5Q9UPZ3 1129 aa14.02□□□□□ -0.16
RIPK3-204ENST00000554756 CYTH3O43739 400 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 STRNO43815 780 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 ADCY3O60266 1144 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
RIPK3-204ENST00000554756 ELNP15502 786 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 PDCP20941 246 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 ADORA2AP29274 412 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 RGS2P41220 211 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 GNAQP50148 359 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 MAP2K5Q13163 448 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 GRB14Q14449 540 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 KCTD2Q14681 263 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 RTN1Q16799 776 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 SRBD1Q8N5C6 995 aaKnown RBP14.01□□□□□ -0.17
RIPK3-204ENST00000554756 CHST13Q8NET6 341 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 SH3TC2Q8TF17 1288 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 USP6NLQ92738 828 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 PIGSQ96S52 555 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 AGXT2Q9BYV1 514 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 RIOX1Q9H6W3 641 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 STX6O43752 255 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 COBLO75128 1261 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
RIPK3-204ENST00000554756 PGK2P07205 417 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 IRF5Q13568 498 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 DPP9Q86TI2 863 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 FBXL16Q8N461 479 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 NPLOC4Q8TAT6 608 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
RIPK3-204ENST00000554756 COL11A1P12107 1806 aaPredicted RBP14□□□□□ -0.17
RIPK3-204ENST00000554756 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
RIPK3-204ENST00000554756 NCLP19338 710 aaKnown RBP14□□□□□ -0.17
RIPK3-204ENST00000554756 CDC27P30260 824 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 GRK4P32298 578 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 METAP2P50579 478 aaKnown RBP eCLIP14□□□□□ -0.17
RIPK3-204ENST00000554756 CCL14Q16627 93 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 TMTC3Q6ZXV5 915 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 FBXO11Q86XK2 927 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 ANKRD35Q8N283 1001 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 MTMR8Q96EF0 704 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 DDX11Q96FC9 970 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 ABHD8Q96I13 439 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 RBM28Q9NW13 759 aaKnown RBP14□□□□□ -0.17
RIPK3-204ENST00000554756 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
RIPK3-204ENST00000554756 FBXO40Q9UH90 709 aa14□□□□□ -0.17
RIPK3-204ENST00000554756 ZBTB5O15062 677 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 PPP1R11O60927 126 aaPredicted RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 PDIA3P30101 505 aaKnown RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 CCT2P78371 535 aaKnown RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 STK3Q13188 491 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 APBA2Q99767 749 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 hCG_1642624A0A1W2PR95 340 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 NFIBO00712 420 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 SYT1P21579 422 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
RIPK3-204ENST00000554756 NSMFQ6X4W1 530 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 CLEC4DQ8WXI8 215 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 AMNQ9BXJ7 453 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
RIPK3-204ENST00000554756 MGAMO43451 1857 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 F13A1P00488 732 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 EVCP57679 992 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 TRIM32Q13049 653 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 ME3Q16798 604 aa13.98□□□□□ -0.17
RIPK3-204ENST00000554756 ZSCAN23Q3MJ62 389 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms