RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 COL11A1P12107 1806 aaPredicted RBP15.03■□□□□ -0
MTHFD1-208ENST00000554739 KIAA0100Q14667 2235 aaKnown RBP15.02■□□□□ -0
MTHFD1-208ENST00000554739 POTEB2H3BUK9 544 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 NFIBO00712 420 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 RPS6KB1P23443 525 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 SMARCA1P28370 1054 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 CCND3P30281 292 aaPredicted RBP15.02■□□□□ -0
MTHFD1-208ENST00000554739 CNTN2Q02246 1040 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 MAMDC4Q6UXC1 1216 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 ZNF467Q7Z7K2 595 aaPredicted RBP15.02■□□□□ -0
MTHFD1-208ENST00000554739 FANCBQ8NB91 859 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 TRPV1Q8NER1 839 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 CTCFLQ8NI51 663 aaPredicted RBP15.02■□□□□ -0
MTHFD1-208ENST00000554739 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
MTHFD1-208ENST00000554739 FGD4Q96M96 766 aa15.02■□□□□ -0
MTHFD1-208ENST00000554739 ZNF236Q9UL36 1845 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 PFASO15067 1338 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 SOWAHBA6NEL2 793 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 ZBTB5O15062 677 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 PPP1R11O60927 126 aaPredicted RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 CYBAP13498 195 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 RXRAP19793 462 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 CASTP20810 708 aaKnown RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 BAATQ14032 418 aaPredicted RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 USH1GQ495M9 461 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 PRAMEF19Q5SWL8 479 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 LHX8Q68G74 356 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 APOA5Q6Q788 366 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 NSMFQ6X4W1 530 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 Q6ZUG5 572 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 FBXO11Q86XK2 927 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 RAB11FIP4Q86YS3 637 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 CCDC144CPQ8IYA2 1237 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 MSL3Q8N5Y2 521 aaKnown RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 RGS22Q8NE09 1264 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 SHISA4Q96DD7 197 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 PIGSQ96S52 555 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 LZTS2Q9BRK4 669 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 TM6SF1Q9BZW5 370 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 MKI67P46013 3256 aaKnown RBP15.01□□□□□ -0.01
MTHFD1-208ENST00000554739 ABCB11O95342 1321 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 PNMA6FA0A0J9YX94 578 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 GNAQP50148 359 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 SYNE3Q6ZMZ3 975 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 RUFY3Q7L099 469 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 CMTR1Q8N1G2 835 aaKnown RBP15□□□□□ -0.01
MTHFD1-208ENST00000554739 SRBD1Q8N5C6 995 aaKnown RBP15□□□□□ -0.01
MTHFD1-208ENST00000554739 PURBQ96QR8 312 aaKnown RBP15□□□□□ -0.01
MTHFD1-208ENST00000554739 SPZ1Q9BXG8 430 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 AGXT2Q9BYV1 514 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 MAF1Q9H063 256 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 NRBP1Q9UHY1 535 aa15□□□□□ -0.01
MTHFD1-208ENST00000554739 ASTN1O14525 1302 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 SYNGAP1Q96PV0 1343 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 ZBTB43O43298 467 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 PLEKHA8P1O95397 391 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 SNAI1O95863 264 aaPredicted RBP14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 CAPN2P17655 700 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 FGD1P98174 961 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 C8orf34Q49A92 452 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 RNF207Q6ZRF8 634 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 MICU3Q86XE3 530 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 TBC1D5Q92609 795 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 BRF1Q92994 677 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 PCDHA1Q9Y5I3 950 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 CYP46A1Q9Y6A2 500 aa14.99□□□□□ -0.01
MTHFD1-208ENST00000554739 PTPDC1A2A3K4 754 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 ZNF865P0CJ78 1059 aaPredicted RBP14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 CNGA1P29973 690 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 RCAN1P53805 252 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 EVCP57679 992 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 ANAPC15P60006 121 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 RPS6P62753 249 aaKnown RBP14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 APOBRQ0VD83 1088 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 SLC30A10Q6XR72 485 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 FAM217BQ9NTX9 383 aaPredicted RBP14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 DDX20Q9UHI6 824 aaKnown RBP14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 OGDHLQ9ULD0 1010 aa14.98□□□□□ -0.01
MTHFD1-208ENST00000554739 OPLAHO14841 1288 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 SEPT4O43236 478 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 CALML3P27482 149 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 MLLT1Q03111 559 aaPredicted RBP14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 TRAF1Q13077 416 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 UBE2Q1Q7Z7E8 422 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 MCF2L2Q86YR7 1114 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 RRP36Q96EU6 259 aaKnown RBP14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 RBM28Q9NW13 759 aaKnown RBP14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.97□□□□□ -0.01
MTHFD1-208ENST00000554739 CNPY2Q9Y2B0 182 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms