RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-228ENST00000554592 HDLBPQ00341 1268 aaKnown RBP6.54□□□□□ -1.36
ATXN3-228ENST00000554592 HP1BP3Q5SSJ5 553 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-228ENST00000554592 SEZ6L2Q6UXD5 910 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 GATA6Q92908 595 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 CRELD1Q96HD1 420 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 ACSS3Q9H6R3 686 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-228ENST00000554592 KRT82Q9NSB4 513 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 FAM8A1Q9UBU6 413 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-228ENST00000554592 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-228ENST00000554592 ENC1O14682 589 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 F13BP05160 661 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 BMP6P22004 513 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 GSTT1P30711 240 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 USP11P51784 963 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 FANCCQ00597 558 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 KIF4BQ2VIQ3 1234 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
ATXN3-228ENST00000554592 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 SEMA6CQ9H3T2 930 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
ATXN3-228ENST00000554592 GPN3Q9UHW5 284 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-228ENST00000554592 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-228ENST00000554592 PAGE1O75459 146 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 NME2P22392 152 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 ARNTP27540 789 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 ADMP35318 185 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-228ENST00000554592 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
ATXN3-228ENST00000554592 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 PDE3AQ14432 1141 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 MEI1Q5TIA1 1274 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
ATXN3-228ENST00000554592 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-228ENST00000554592 SULF2Q8IWU5 870 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 PANK3Q9H999 370 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 PPM1HQ9ULR3 514 aa6.52□□□□□ -1.37
ATXN3-228ENST00000554592 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 A1BGP04217 495 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 NFICP08651 508 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 SSTR4P31391 388 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 RASIP1Q5U651 963 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 DYMQ7RTS9 669 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 DISC1Q9NRI5 854 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 METTL5Q9NRN9 209 aaKnown RBP6.51□□□□□ -1.37
ATXN3-228ENST00000554592 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
ATXN3-228ENST00000554592 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-228ENST00000554592 COBLO75128 1261 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 ASPAP45381 313 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-228ENST00000554592 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 ZAR1Q86SH2 424 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 NBPF11Q86T75 865 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 RNF34Q969K3 372 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 AP4E1Q9UPM8 1137 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
ATXN3-228ENST00000554592 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-228ENST00000554592 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 ADAMTS4O75173 837 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms