RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 TFAP4Q01664 338 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 ITGA7Q13683 1181 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 TTLL4Q14679 1199 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 RASIP1Q5U651 963 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 NSMFQ6X4W1 530 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 RPAP2Q8IXW5 612 aaPredicted RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 PCSK9Q8NBP7 692 aaKnown RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 TRERF1Q96PN7 1200 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 UHRF1Q96T88 793 aaPredicted RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 UPF3AQ9H1J1 476 aaKnown RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 WNT8AQ9H1J5 351 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 ABHD16BQ9H3Z7 469 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 HIPK3Q9H422 1215 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 A1CFQ9NQ94 594 aaKnown RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 RNF146Q9NTX7 359 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 TRMT13Q9NUP7 481 aaKnown RBP8□□□□□ -1.13
PCNX4-208ENST00000554534 TRANK1O15050 2925 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 ZNF536O15090 1300 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 ELP1O95163 1332 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
PCNX4-208ENST00000554534 TLR3O15455 904 aaKnown RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 GPAA1O43292 621 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 RAB11FIP3O75154 756 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 HMMRO75330 724 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 MYL3P08590 195 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 FSCN1Q16658 493 aaKnown RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 SBK1Q52WX2 424 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 TAPT1Q6NXT6 567 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 KIAA1211Q6ZU35 1233 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 IFNL3Q8IZI9 196 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 FAM133AQ8N9E0 248 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 HERVK_113Q902F9 699 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 COPS5Q92905 334 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 NOC4LQ9BVI4 516 aaKnown RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 LRRCC1Q9C099 1032 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 AP5M1Q9H0R1 490 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 EPHX3Q9H6B9 360 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 SLC28A3Q9HAS3 691 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 SPC25Q9HBM1 224 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 MTMR4Q9NYA4 1195 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 THEGQ9P2T0 379 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 ARPP21Q9UBL0 812 aaPredicted RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 FEM1BQ9UK73 627 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
PCNX4-208ENST00000554534 LCTP09848 1927 aa7.99□□□□□ -1.13
PCNX4-208ENST00000554534 TSPY3P0CV98 308 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 TSPY8P0CW00 308 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 MRPS5P82675 430 aaKnown RBP7.98□□□□□ -1.13
PCNX4-208ENST00000554534 FAM47CQ5HY64 1035 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 PPP2R2DQ66LE6 453 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 ZSCAN25Q6NSZ9 544 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 CHST13Q8NET6 341 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 ARNTL2Q8WYA1 636 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 KHSRPQ92945 711 aaKnown RBP eCLIP7.98□□□□□ -1.13
PCNX4-208ENST00000554534 ACAD9Q9H845 621 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 GPCPD1Q9NPB8 672 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 IL17RBQ9NRM6 502 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 ECHDC1Q9NTX5 307 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 GNEQ9Y223 722 aaKnown RBP7.98□□□□□ -1.13
PCNX4-208ENST00000554534 SLC4A7Q9Y6M7 1214 aa7.98□□□□□ -1.13
PCNX4-208ENST00000554534 TRIP12Q14669 1992 aaPredicted RBP7.98□□□□□ -1.13
PCNX4-208ENST00000554534 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
PCNX4-208ENST00000554534 TET1Q8NFU7 2136 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 NCOR1O75376 2440 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 FAM86C2PA6NEL3 165 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 ATP2A1O14983 1001 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 SORBS3O60504 671 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 TTLL1O95922 423 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 CA3P07451 260 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 BMP1P13497 986 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 CST5P28325 142 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 COPB2P35606 906 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 BAATQ14032 418 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 PSRC1Q6PGN9 363 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 ZNF467Q7Z7K2 595 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 MSL3Q8N5Y2 521 aaKnown RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 KBTBD3Q8NAB2 608 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 SLC43A3Q8NBI5 491 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 STAG1Q8WVM7 1258 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 ATXN2LQ8WWM7 1075 aaKnown RBP7.97□□□□□ -1.13
PCNX4-208ENST00000554534 APPBP2Q92624 585 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 MKL1Q969V6 931 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 CPVLQ9H3G5 476 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 PRR12Q9ULL5 1215 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 DDX19BQ9UMR2 479 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 STX8Q9UNK0 236 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 MROH7Q68CQ1 1323 aa7.97□□□□□ -1.13
PCNX4-208ENST00000554534 LRRC37A2A6NM11 1700 aa7.96□□□□□ -1.14
PCNX4-208ENST00000554534 NFIBO00712 420 aa7.96□□□□□ -1.14
PCNX4-208ENST00000554534 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.14
PCNX4-208ENST00000554534 ATP2A2P16615 1042 aaKnown RBP7.96□□□□□ -1.14
PCNX4-208ENST00000554534 CALML3P27482 149 aa7.96□□□□□ -1.14
PCNX4-208ENST00000554534 SLC1A4P43007 532 aa7.96□□□□□ -1.14
PCNX4-208ENST00000554534 PPARAQ07869 468 aa7.96□□□□□ -1.14
PCNX4-208ENST00000554534 RAB30Q15771 203 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms