RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 AP5M1Q9H0R1 490 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 TRMT13Q9NUP7 481 aaKnown RBP20.36■□□□□ 0.85
NEK9-204ENST00000554258 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 VPS13AQ96RL7 3174 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 WDR87Q6ZQQ6 2873 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 TNKSO95271 1327 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 BAIAP3O94812 1187 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 CYP2E1P05181 493 aaPredicted RBP20.35■□□□□ 0.85
NEK9-204ENST00000554258 ERVK-21P61565 698 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 SNRNP48Q6IEG0 339 aaKnown RBP20.35■□□□□ 0.85
NEK9-204ENST00000554258 ATOH1Q92858 354 aaPredicted RBP20.35■□□□□ 0.85
NEK9-204ENST00000554258 TEX13BQ9BXU2 312 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 PLXNA3P51805 1871 aa20.35■□□□□ 0.85
NEK9-204ENST00000554258 MYO7AQ13402 2215 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.34■□□□□ 0.85
NEK9-204ENST00000554258 ICA1Q05084 483 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 GABPAQ06546 454 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 TTC39AQ5SRH9 613 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 TMCO2Q7Z6W1 182 aaPredicted RBP20.34■□□□□ 0.85
NEK9-204ENST00000554258 ITPRIPQ8IWB1 547 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 EDAQ92838 391 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 MEIS3Q99687 375 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 IRF2BPLQ9H1B7 796 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 GVINP1Q7Z2Y8 2422 aa20.34■□□□□ 0.85
NEK9-204ENST00000554258 TPRP12270 2363 aaKnown RBP20.34■□□□□ 0.85
NEK9-204ENST00000554258 TRIP12Q14669 1992 aaPredicted RBP20.34■□□□□ 0.85
NEK9-204ENST00000554258 TMEM221A6NGB7 291 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 M0R296 226 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 IGSF3O75054 1194 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 GNAI3P08754 354 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 SLC4A3P48751 1232 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 SIAH1Q8IUQ4 282 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 RETREG2Q8NC44 543 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 KATNBL1Q9H079 304 aa20.33■□□□□ 0.85
NEK9-204ENST00000554258 DYNC1LI2O43237 492 aaPredicted RBP20.32■□□□□ 0.84
NEK9-204ENST00000554258 RNF135Q8IUD6 432 aa20.32■□□□□ 0.84
NEK9-204ENST00000554258 CCDC144CPQ8IYA2 1237 aa20.32■□□□□ 0.84
NEK9-204ENST00000554258 FGD4Q96M96 766 aa20.32■□□□□ 0.84
NEK9-204ENST00000554258 POP1Q99575 1024 aaKnown RBP20.32■□□□□ 0.84
NEK9-204ENST00000554258 PIH1D3Q9NQM4 214 aaKnown RBP20.32■□□□□ 0.84
NEK9-204ENST00000554258 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
NEK9-204ENST00000554258 RIPK3Q9Y572 518 aa20.32■□□□□ 0.84
NEK9-204ENST00000554258 SRGAP3O43295 1099 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 IQCF3P0C7M6 154 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 WDR5P61964 334 aaKnown RBP20.31■□□□□ 0.84
NEK9-204ENST00000554258 ANKRD35Q8N283 1001 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 PABPC5Q96DU9 382 aaKnown RBP20.31■□□□□ 0.84
NEK9-204ENST00000554258 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
NEK9-204ENST00000554258 ZBTB40Q9NUA8 1239 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 CTNNA3Q9UI47 895 aa20.31■□□□□ 0.84
NEK9-204ENST00000554258 DMDP11532 3685 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 LINC01553A4QN01 128 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 RAD21O60216 631 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 ID4P47928 161 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 CCDC158Q5M9N0 1113 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 TRIM67Q6ZTA4 783 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 FBXO22Q8NEZ5 403 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
NEK9-204ENST00000554258 MRPL38Q96DV4 380 aaKnown RBP20.3■□□□□ 0.84
NEK9-204ENST00000554258 RAD9AQ99638 391 aa20.3■□□□□ 0.84
NEK9-204ENST00000554258 PITPNM1O00562 1244 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
NEK9-204ENST00000554258 PTGS1P23219 599 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 EVX2Q03828 476 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 PTPROQ16827 1216 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 TIGD5Q53EQ6 642 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 FBXL6Q8N531 539 aa20.29■□□□□ 0.84
NEK9-204ENST00000554258 KMT2BQ9UMN6 2715 aaPredicted RBP20.28■□□□□ 0.84
NEK9-204ENST00000554258 KRT37O76014 449 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 ZAP70P43403 619 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 DEFB103AP81534 67 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 FAM83BQ5T0W9 1011 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 ASCL5Q7RTU5 278 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
NEK9-204ENST00000554258 SOWAHBA6NEL2 793 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 GJB5O95377 273 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 GNAI2P04899 355 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 AKR1B1P15121 316 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 SMPD1P17405 629 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 FAM47CQ5HY64 1035 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 CPXCR1Q8N123 301 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 BANK1Q8NDB2 785 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 GOPCQ9HD26 462 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.84
NEK9-204ENST00000554258 NCOR2Q9Y618 2525 aa20.27■□□□□ 0.84
NEK9-204ENST00000554258 BFSP2Q13515 415 aa20.26■□□□□ 0.83
NEK9-204ENST00000554258 AAMPQ13685 434 aa20.26■□□□□ 0.83
NEK9-204ENST00000554258 SMAD2Q15796 467 aaKnown RBP20.26■□□□□ 0.83
NEK9-204ENST00000554258 SLF1Q9BQI6 1058 aa20.26■□□□□ 0.83
NEK9-204ENST00000554258 CLDND1Q9NY35 253 aa20.26■□□□□ 0.83
NEK9-204ENST00000554258 PROB1E7EW31 1015 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 MTX1Q13505 466 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 TCEAL5Q5H9L2 206 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 C17orf80Q9BSJ5 609 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 SWAP70Q9UH65 585 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms