RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 TRIM6-TRIM34B2RNG4 842 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 CTAGE5O15320 804 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 ICAM1P05362 532 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
TUBB3-203ENST00000553967 NKX3-2P78367 333 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-203ENST00000553967 TMEM47Q9BQJ4 181 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 SEMA6BQ9H3T3 888 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 CYP39A1Q9NYL5 469 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 TBX21Q9UL17 535 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
TUBB3-203ENST00000553967 ARVCFO00192 962 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 TIMP1P01033 207 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 SLC16A2P36021 539 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 BEX3Q00994 111 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 AAMPQ13685 434 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 BTNL9Q6UXG8 535 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 NSMFQ6X4W1 530 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 RANBP17Q9H2T7 1088 aaKnown RBP18.63■□□□□ 0.57
TUBB3-203ENST00000553967 GNEQ9Y223 722 aaKnown RBP18.63■□□□□ 0.57
TUBB3-203ENST00000553967 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
TUBB3-203ENST00000553967 ASTN1O14525 1302 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 ZMYM6O95789 1325 aa18.63■□□□□ 0.57
TUBB3-203ENST00000553967 HAND2P61296 217 aa18.62■□□□□ 0.57
TUBB3-203ENST00000553967 SYDE2Q5VT97 1194 aa18.62■□□□□ 0.57
TUBB3-203ENST00000553967 TLK2Q86UE8 772 aa18.62■□□□□ 0.57
TUBB3-203ENST00000553967 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
TUBB3-203ENST00000553967 CDX2Q99626 313 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-203ENST00000553967 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
TUBB3-203ENST00000553967 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 FRMPD2Q68DX3 1309 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-203ENST00000553967 SMPD1P17405 629 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 IQSEC1Q6DN90 963 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 B4GALNT3Q6L9W6 998 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 MFSD5Q6N075 450 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 EEPD1Q7L9B9 569 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 SMC5Q8IY18 1101 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 PURBQ96QR8 312 aaKnown RBP18.61■□□□□ 0.57
TUBB3-203ENST00000553967 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 TTYH1Q9H313 450 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-203ENST00000553967 RWDD1Q9H446 243 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-203ENST00000553967 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
TUBB3-203ENST00000553967 TLR3O15455 904 aaKnown RBP18.6■□□□□ 0.57
TUBB3-203ENST00000553967 DYNC1LI2O43237 492 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-203ENST00000553967 PCP11498 1178 aaKnown RBP18.6■□□□□ 0.57
TUBB3-203ENST00000553967 FSCN1Q16658 493 aaKnown RBP18.6■□□□□ 0.57
TUBB3-203ENST00000553967 AKNAD1Q5T1N1 836 aa18.6■□□□□ 0.57
TUBB3-203ENST00000553967 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
TUBB3-203ENST00000553967 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
TUBB3-203ENST00000553967 FBXO16Q8IX29 292 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-203ENST00000553967 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
TUBB3-203ENST00000553967 TTC14Q96N46 770 aa18.6■□□□□ 0.57
TUBB3-203ENST00000553967 CABYRO75952 493 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 PDHBP11177 359 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 SDSP20132 328 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 PTGS1P23219 599 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 MFAP1P55081 439 aaKnown RBP18.59■□□□□ 0.57
TUBB3-203ENST00000553967 BAATQ14032 418 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-203ENST00000553967 TBC1D10CQ8IV04 446 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 MORC4Q8TE76 937 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 VTA1Q9NP79 307 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
TUBB3-203ENST00000553967 Q9Y3F1 56 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 CDH23Q9H251 3354 aa18.59■□□□□ 0.57
TUBB3-203ENST00000553967 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.57
TUBB3-203ENST00000553967 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-203ENST00000553967 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-203ENST00000553967 NFIBO00712 420 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 ZEB2O60315 1214 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 CD4P01730 458 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 PPIGQ13427 754 aaKnown RBP eCLIP18.58■□□□□ 0.56
TUBB3-203ENST00000553967 CHD1LQ86WJ1 897 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 TMEM199Q8N511 208 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 SLC43A3Q8NBI5 491 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.58■□□□□ 0.56
TUBB3-203ENST00000553967 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-203ENST00000553967 LCTP09848 1927 aa18.58■□□□□ 0.56
TUBB3-203ENST00000553967 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 TMEM265A0A087WTH1 108 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 PTPDC1A2A3K4 754 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 CSF2RAP15509 400 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-203ENST00000553967 NUCB1Q02818 461 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 ZNF543Q08ER8 600 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 TMEM63BQ5T3F8 832 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 KIAA1211Q6ZU35 1233 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 C16orf59Q7L2K0 433 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.57■□□□□ 0.56
TUBB3-203ENST00000553967 MYLIPQ8WY64 445 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
TUBB3-203ENST00000553967 OSBPL3Q9H4L5 887 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 PNMA2Q9UL42 364 aa18.57■□□□□ 0.56
TUBB3-203ENST00000553967 NEDD4P46934 1319 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms