RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MYH6P13533 1939 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 TNRC18O15417 2968 aaPredicted RBP27.07■■□□□ 1.92
NEK9-203ENST00000553945 NFIBO00712 420 aa27.06■■□□□ 1.92
NEK9-203ENST00000553945 KIF5BP33176 963 aa27.06■■□□□ 1.92
NEK9-203ENST00000553945 BLOC1S2Q6QNY1 142 aa27.06■■□□□ 1.92
NEK9-203ENST00000553945 RAB11FIP4Q86YS3 637 aa27.06■■□□□ 1.92
NEK9-203ENST00000553945 CALM1P0DP23 149 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CALM2P0DP24 149 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CALM3P0DP25 149 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 RXRAP19793 462 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 FGD1P98174 961 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CNTN2Q02246 1040 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 PRAMEF19Q5SWL8 479 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 SYNE3Q6ZMZ3 975 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 SGMS1Q86VZ5 419 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 FBXO11Q86XK2 927 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 TRPV1Q8NER1 839 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CLEC4DQ8WXI8 215 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CYP39A1Q9NYL5 469 aa27.05■■□□□ 1.92
NEK9-203ENST00000553945 CYBAP13498 195 aa27.04■■□□□ 1.92
NEK9-203ENST00000553945 SLC35G1Q2M3R5 365 aa27.04■■□□□ 1.92
NEK9-203ENST00000553945 ZNF467Q7Z7K2 595 aaPredicted RBP27.04■■□□□ 1.92
NEK9-203ENST00000553945 HOMER1Q86YM7 354 aa27.04■■□□□ 1.92
NEK9-203ENST00000553945 CCDC144CPQ8IYA2 1237 aa27.04■■□□□ 1.92
NEK9-203ENST00000553945 FAM133AQ8N9E0 248 aa27.04■■□□□ 1.92
NEK9-203ENST00000553945 ABCB11O95342 1321 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 CASTP20810 708 aaKnown RBP27.03■■□□□ 1.92
NEK9-203ENST00000553945 PSMA5P28066 241 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 BAATQ14032 418 aaPredicted RBP27.03■■□□□ 1.92
NEK9-203ENST00000553945 MSL3Q8N5Y2 521 aaKnown RBP27.03■■□□□ 1.92
NEK9-203ENST00000553945 MTMR8Q96EF0 704 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 FGD4Q96M96 766 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 CRISPLD2Q9H0B8 497 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 RIOX1Q9H6W3 641 aa27.03■■□□□ 1.92
NEK9-203ENST00000553945 MKI67P46013 3256 aaKnown RBP27.03■■□□□ 1.92
NEK9-203ENST00000553945 PTPDC1A2A3K4 754 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 SOWAHBA6NEL2 793 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 CYTH3O43739 400 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 RPS6KB1P23443 525 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 MICU3Q86XE3 530 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 PIGSQ96S52 555 aa27.02■■□□□ 1.92
NEK9-203ENST00000553945 SYNGAP1Q96PV0 1343 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 ZBTB5O15062 677 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 GNAQP50148 359 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 APOA5Q6Q788 366 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 MAMDC4Q6UXC1 1216 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 RNF207Q6ZRF8 634 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 Q6ZUG5 572 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 PIBF1Q8WXW3 757 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 AMNQ9BXJ7 453 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 BRPF3Q9ULD4 1205 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 CNPY2Q9Y2B0 182 aa27.01■■□□□ 1.91
NEK9-203ENST00000553945 KLF18A0A0U1RQI7 1052 aa27■■□□□ 1.91
NEK9-203ENST00000553945 EIF5BO60841 1220 aaKnown RBP27■■□□□ 1.91
NEK9-203ENST00000553945 PLEKHA8P1O95397 391 aa27■■□□□ 1.91
NEK9-203ENST00000553945 CAPN2P17655 700 aa27■■□□□ 1.91
NEK9-203ENST00000553945 CALML3P27482 149 aa27■■□□□ 1.91
NEK9-203ENST00000553945 LHX8Q68G74 356 aa27■■□□□ 1.91
NEK9-203ENST00000553945 SLC30A10Q6XR72 485 aa27■■□□□ 1.91
NEK9-203ENST00000553945 FANCBQ8NB91 859 aa27■■□□□ 1.91
NEK9-203ENST00000553945 PURBQ96QR8 312 aaKnown RBP27■■□□□ 1.91
NEK9-203ENST00000553945 LZTS2Q9BRK4 669 aa27■■□□□ 1.91
NEK9-203ENST00000553945 DDX20Q9UHI6 824 aaKnown RBP27■■□□□ 1.91
NEK9-203ENST00000553945 NRBP1Q9UHY1 535 aa27■■□□□ 1.91
NEK9-203ENST00000553945 NAP1L2Q9ULW6 460 aaPredicted RBP27■■□□□ 1.91
NEK9-203ENST00000553945 MRPL11Q9Y3B7 192 aaKnown RBP27■■□□□ 1.91
NEK9-203ENST00000553945 ZBTB43O43298 467 aa26.99■■□□□ 1.91
NEK9-203ENST00000553945 PPP1R11O60927 126 aaPredicted RBP26.99■■□□□ 1.91
NEK9-203ENST00000553945 SPZ1Q9BXG8 430 aa26.99■■□□□ 1.91
NEK9-203ENST00000553945 LCTP09848 1927 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 FRMPD3Q5JV73 1810 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 SEPT4O43236 478 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 MSCO60682 206 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 FARP2O94887 1054 aaPredicted RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 SNAI1O95863 264 aaPredicted RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 RPS6P62753 249 aaKnown RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 ANO1Q5XXA6 986 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 ARMCX2Q7L311 632 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 CMTR1Q8N1G2 835 aaKnown RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 SRBD1Q8N5C6 995 aaKnown RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 BRF1Q92994 677 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 OGDHLQ9ULD0 1010 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 PCDHA1Q9Y5I3 950 aa26.98■■□□□ 1.91
NEK9-203ENST00000553945 BAZ2BQ9UIF8 2168 aaKnown RBP26.98■■□□□ 1.91
NEK9-203ENST00000553945 ASTN1O14525 1302 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 MCM3APO60318 1980 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 PNMA6FA0A0J9YX94 578 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 ASB14A6NK59 587 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 SMARCA1P28370 1054 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 APOBRQ0VD83 1088 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 TRAF1Q13077 416 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 RUFY3Q7L099 469 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 RGS22Q8NE09 1264 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 RRP36Q96EU6 259 aaKnown RBP26.97■■□□□ 1.91
NEK9-203ENST00000553945 ZSWIM6Q9HCJ5 1215 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 ADD3Q9UEY8 706 aaKnown RBP26.97■■□□□ 1.91
NEK9-203ENST00000553945 ZHX1Q9UKY1 873 aaPredicted RBP26.97■■□□□ 1.91
NEK9-203ENST00000553945 CYP46A1Q9Y6A2 500 aa26.97■■□□□ 1.91
NEK9-203ENST00000553945 ZNF865P0CJ78 1059 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms