RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GLMNQ92990 594 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 KIFC2Q96AC6 838 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 ATG4CQ96DT6 458 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 GMCL1Q96IK5 515 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 PPP1R9AQ9ULJ8 1098 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 B4E1Z4 1266 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 TMEM232C9JQI7 657 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 ADCY3O60266 1144 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-209ENST00000553855 MCCP23508 829 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 RGS2P41220 211 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 PTH1RQ03431 593 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 IRF5Q13568 498 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 SWT1Q5T5J6 900 aaKnown RBP9.77□□□□□ -0.85
PSEN1-209ENST00000553855 RCSD1Q6JBY9 416 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 NCAPG2Q86XI2 1143 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 DGKHQ86XP1 1220 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 SHCBP1Q8NEM2 672 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 MAP4K1Q92918 833 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 ZSCAN10Q96SZ4 725 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-209ENST00000553855 NUP88Q99567 741 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-209ENST00000553855 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 MROH8Q9H579 483 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
PSEN1-209ENST00000553855 NEDD4P46934 1319 aa9.77□□□□□ -0.85
PSEN1-209ENST00000553855 PTPRFP10586 1907 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 SLC15A5A6NIM6 579 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 VWA5AO00534 786 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 STRNO43815 780 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 NMT2O60551 498 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 REC8O95072 547 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 CYP21A2P08686 494 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 CYP2B6P20813 491 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 STAT3P40763 770 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 KCTD2Q14681 263 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 Q3C1V9 767 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 KIAA1755Q5JYT7 1200 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 IFIT1BQ5T764 474 aaKnown RBP9.76□□□□□ -0.85
PSEN1-209ENST00000553855 DPP9Q86TI2 863 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 SKAP1Q86WV1 359 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 CHMP4CQ96CF2 233 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 ZKSCAN3Q9BRR0 538 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 TEX13BQ9BXU2 312 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 IL17RBQ9NRM6 502 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 BTBD7Q9P203 1132 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 PNMA2Q9UL42 364 aa9.76□□□□□ -0.85
PSEN1-209ENST00000553855 GOLGA8CPA6NN73 597 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 IFIT3O14879 490 aaKnown RBP9.75□□□□□ -0.85
PSEN1-209ENST00000553855 FCER1AP12319 257 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 ERCC3P19447 782 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 CTGFP29279 349 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 GPATCH4Q5T3I0 446 aaKnown RBP9.75□□□□□ -0.85
PSEN1-209ENST00000553855 SNRNP48Q6IEG0 339 aaKnown RBP9.75□□□□□ -0.85
PSEN1-209ENST00000553855 KCTD1Q719H9 257 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 CPXCR1Q8N123 301 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 SH3TC2Q8TF17 1288 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 ARMC5Q96C12 935 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 MOV10L1Q9BXT6 1211 aaKnown RBP9.75□□□□□ -0.85
PSEN1-209ENST00000553855 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 PORCNQ9H237 461 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 IL25Q9H293 177 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 FBXO40Q9UH90 709 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 GABRQQ9UN88 632 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 TNKSO95271 1327 aa9.75□□□□□ -0.85
PSEN1-209ENST00000553855 E7EWF7 191 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 DHX16O60231 1041 aaKnown RBP9.74□□□□□ -0.85
PSEN1-209ENST00000553855 PLA2G6O60733 806 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 CNMDO75829 334 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-209ENST00000553855 HMGCRP04035 888 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
PSEN1-209ENST00000553855 OAZ1P54368 228 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 KRT32Q14532 448 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 TMEM132BQ14DG7 1078 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 WTAPQ15007 396 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 MFSD14CQ5VZR4 134 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 RIOX2Q8IUF8 465 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 HLA-CQ95604 372 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 DDX11Q96FC9 970 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 MMP19Q99542 508 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 APBA2Q99767 749 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 LSG1Q9H089 658 aaKnown RBP9.74□□□□□ -0.85
PSEN1-209ENST00000553855 RABGEF1Q9UJ41 708 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
PSEN1-209ENST00000553855 SLC27A2O14975 620 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 PEX10O60683 326 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms