RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 SLC1A4P43007 532 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 ITGA7Q13683 1181 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 FSCN1Q16658 493 aaKnown RBP21.06■□□□□ 0.96
SYNE2-211ENST00000553801 TLK2Q86UE8 772 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 TRERF1Q96PN7 1200 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 THEGQ9P2T0 379 aa21.06■□□□□ 0.96
SYNE2-211ENST00000553801 GNEQ9Y223 722 aaKnown RBP21.06■□□□□ 0.96
SYNE2-211ENST00000553801 SOWAHBA6NEL2 793 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 M0R2C6 588 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 PLA2G6O60733 806 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 TFAP4Q01664 338 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 IQSEC1Q6DN90 963 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 AGBL1Q96MI9 1066 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 SLC28A3Q9HAS3 691 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 Q9Y3F1 56 aa21.05■□□□□ 0.96
SYNE2-211ENST00000553801 ASTN1O14525 1302 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 DYNC1LI2O43237 492 aaPredicted RBP21.04■□□□□ 0.96
SYNE2-211ENST00000553801 ALAS1P13196 640 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
SYNE2-211ENST00000553801 ASB2Q96Q27 587 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 NAPBQ9H115 298 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 ZNF536O15090 1300 aa21.04■□□□□ 0.96
SYNE2-211ENST00000553801 IGFBP4P22692 258 aa21.03■□□□□ 0.96
SYNE2-211ENST00000553801 MCCP23508 829 aa21.03■□□□□ 0.96
SYNE2-211ENST00000553801 MRPS5P82675 430 aaKnown RBP21.03■□□□□ 0.96
SYNE2-211ENST00000553801 NKX2-4Q9H2Z4 354 aa21.03■□□□□ 0.96
SYNE2-211ENST00000553801 DCTPP1Q9H773 170 aa21.03■□□□□ 0.96
SYNE2-211ENST00000553801 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
SYNE2-211ENST00000553801 SMPD1P17405 629 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 PPARAQ07869 468 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 TSHZ3Q63HK5 1081 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 RCSD1Q6JBY9 416 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 OTOP2Q7RTS6 562 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 IL27Q8NEV9 243 aa21.02■□□□□ 0.96
SYNE2-211ENST00000553801 NOC4LQ9BVI4 516 aaKnown RBP21.02■□□□□ 0.96
SYNE2-211ENST00000553801 TSPYL2Q9H2G4 693 aaPredicted RBP21.02■□□□□ 0.96
SYNE2-211ENST00000553801 CCL23P55773 120 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 ADGRE1Q14246 886 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 CCDC85BQ15834 202 aaPredicted RBP21.01■□□□□ 0.95
SYNE2-211ENST00000553801 VTA1Q9NP79 307 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 CYP39A1Q9NYL5 469 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 STX8Q9UNK0 236 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 SLC4A7Q9Y6M7 1214 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 NCOR1O75376 2440 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 GRIN2DO15399 1336 aa21.01■□□□□ 0.95
SYNE2-211ENST00000553801 ERC2O15083 957 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 B4GALT4O60513 344 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 TAPT1Q6NXT6 567 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 KCTD1Q719H9 257 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 EEPD1Q7L9B9 569 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 TRPV6Q9H1D0 765 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 PDGFCQ9NRA1 345 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 UMODL1Q5DID0 1318 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
SYNE2-211ENST00000553801 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 SUPT20HL2P0C7V6 817 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 COL9A1P20849 921 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 NSMFQ6X4W1 530 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
SYNE2-211ENST00000553801 ADAMTS19Q8TE59 1207 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 CHMP4CQ96CF2 233 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 SEC62Q99442 399 aaKnown RBP20.99■□□□□ 0.95
SYNE2-211ENST00000553801 CCPG1Q9ULG6 757 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 PRR12Q9ULL5 1215 aa20.99■□□□□ 0.95
SYNE2-211ENST00000553801 YBX2Q9Y2T7 364 aaKnown RBP20.99■□□□□ 0.95
SYNE2-211ENST00000553801 MUM1L1Q5H9M0 696 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 ZMYM1Q5SVZ6 1142 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 MORC4Q8TE76 937 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 FSD1Q9BTV5 496 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 WNT8AQ9H1J5 351 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 POLR3EQ9NVU0 708 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
SYNE2-211ENST00000553801 PCDHA11Q9Y5I1 949 aa20.98■□□□□ 0.95
SYNE2-211ENST00000553801 LOC102724159A0A0B4J2E5 919 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 ZBBXA8MT70 800 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 PFKMP08237 780 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 SNAP25P60880 206 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 PSMC6P62333 389 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 PWP2Q15269 919 aaKnown RBP20.97■□□□□ 0.95
SYNE2-211ENST00000553801 DUSP28Q4G0W2 176 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 PPP2R2DQ66LE6 453 aa20.97■□□□□ 0.95
SYNE2-211ENST00000553801 UHRF1Q96T88 793 aaPredicted RBP20.97■□□□□ 0.95
SYNE2-211ENST00000553801 ALDH8A1Q9H2A2 487 aaPredicted RBP20.97■□□□□ 0.95
SYNE2-211ENST00000553801 GBF1Q92538 1859 aa20.96■□□□□ 0.95
SYNE2-211ENST00000553801 ICAM1P05362 532 aa20.96■□□□□ 0.95
SYNE2-211ENST00000553801 RABGGTBP53611 331 aa20.96■□□□□ 0.95
SYNE2-211ENST00000553801 DCAF4Q8WV16 495 aa20.96■□□□□ 0.95
SYNE2-211ENST00000553801 IL17RBQ9NRM6 502 aa20.96■□□□□ 0.95
SYNE2-211ENST00000553801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.96■□□□□ 0.95
SYNE2-211ENST00000553801 DDX49Q9Y6V7 483 aaKnown RBP20.96■□□□□ 0.95
SYNE2-211ENST00000553801 ATP2A2P16615 1042 aaKnown RBP20.95■□□□□ 0.94
SYNE2-211ENST00000553801 PTGS1P23219 599 aa20.95■□□□□ 0.94
SYNE2-211ENST00000553801 CPT1AP50416 773 aa20.95■□□□□ 0.94
SYNE2-211ENST00000553801 CCDC96Q2M329 555 aa20.95■□□□□ 0.94
SYNE2-211ENST00000553801 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
SYNE2-211ENST00000553801 SCLYQ96I15 445 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms