RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 USP50Q70EL3 339 aaPredicted RBP11.21□□□□□ -0.62
CFAP54-204ENST00000553778 KIAA0825Q8IV33 1275 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 GMLQ99445 158 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.62
CFAP54-204ENST00000553778 MYO6Q9UM54 1294 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 AKR1B15C9JRZ8 316 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 F8W031 263 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 PRPHP41219 470 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 PDCD2Q16342 344 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 NUCKS1Q9H1E3 243 aaKnown RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 FANCLQ9NW38 375 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
CFAP54-204ENST00000553778 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 SCN9AQ15858 1988 aa11.2□□□□□ -0.62
CFAP54-204ENST00000553778 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 STK3Q13188 491 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 RASGRF1Q13972 1273 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 CDCA2Q69YH5 1023 aaPredicted RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 TTC19Q6DKK2 380 aaPredicted RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 FAM43BQ6ZT52 329 aaPredicted RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 CERS5Q8N5B7 392 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 NOA1Q8NC60 698 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 C1orf131Q8NDD1 294 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 FTOQ9C0B1 505 aaKnown RBP eCLIP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SUGT1Q9Y2Z0 365 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SPTLC2O15270 562 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 TOMM70O94826 608 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 MCAMP43121 646 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 NAP1L1P55209 391 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 CKAP4Q07065 602 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 STK38Q15208 465 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 ZC3H12AQ5D1E8 599 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 PARP9Q8IXQ6 854 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SLC35F6Q8N357 371 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 P3H4Q92791 437 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 RSRC1Q96IZ7 334 aaKnown RBP11.19□□□□□ -0.62
CFAP54-204ENST00000553778 SLC40A1Q9NP59 571 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 MYOZ2Q9NPC6 264 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
CFAP54-204ENST00000553778 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 MYBL2P10244 700 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 ATP5JP18859 108 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 APBA1Q02410 837 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 CCNI2Q6ZMN8 369 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 PDILTQ8N807 584 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 ENOX1Q8TC92 643 aaKnown RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 AENQ8WTP8 325 aaKnown RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 DESI2Q9BSY9 194 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 SELENOOQ9BVL4 669 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-204ENST00000553778 EPN3Q9H201 632 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 LZTFL1Q9NQ48 299 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 HPSEQ9Y251 543 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 SCN4AP35499 1836 aa11.18□□□□□ -0.62
CFAP54-204ENST00000553778 PTPDC1A2A3K4 754 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 BIN1O00499 593 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
CFAP54-204ENST00000553778 PFKFB1P16118 471 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 PECAM1P16284 738 aaPredicted RBP11.17□□□□□ -0.62
CFAP54-204ENST00000553778 RBM5P52756 815 aaKnown RBP eCLIP11.17□□□□□ -0.62
CFAP54-204ENST00000553778 ADKP55263 362 aaKnown RBP11.17□□□□□ -0.62
CFAP54-204ENST00000553778 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 NR1I3Q14994 352 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 SLC5A9Q2M3M2 681 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 C6orf89Q6UWU4 347 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 MAST3O60307 1309 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 LIN7AO14910 233 aaPredicted RBP11.17□□□□□ -0.62
CFAP54-204ENST00000553778 GCKP35557 465 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 ITIH3Q06033 890 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 SCARF1Q14162 830 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 IQCEQ6IPM2 695 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 CYB5D1Q6P9G0 228 aa11.17□□□□□ -0.62
CFAP54-204ENST00000553778 RAD9BQ6WBX8 426 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms