RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 KRIT1O00522 736 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 SIK1P57059 783 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 SNX16P57768 344 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPARDQ03181 441 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 RABGGTAQ92696 567 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 CDC23Q9UJX2 597 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 CD19P15391 556 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 TUBGCP2Q9BSJ2 902 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 CIB2O75838 187 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 MMP1P03956 469 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 CRKLP46109 303 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 ADAM9Q13443 819 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPP2R5EQ16537 467 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 HOOK2Q96ED9 719 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 METTL14Q9HCE5 456 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 CCDC160A6NGH7 325 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 PSMC4P43686 418 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 TNNI1P19237 187 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 A0A087WWV3 80 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 VSIG1Q86XK7 387 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 SIGLEC1Q9BZZ2 1709 aa16.87■□□□□ 0.29
ARHGEF40-202ENST00000553709 IFNAR1P17181 557 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 EEF1GP26641 437 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 CEP85LQ5SZL2 805 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 OTUD6AQ7L8S5 288 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 CCDC110Q8TBZ0 833 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 GOLGA8KD6RF30 607 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 SLFN14P0C7P3 912 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 KRT15P19012 456 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 BAG6P46379 1132 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 RASA3Q14644 834 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 PDE6BP35913 854 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
ARHGEF40-202ENST00000553709 H2AFZP0C0S5 128 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 CERKLQ49MI3 558 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 H2AFVQ71UI9 128 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM178BQ8IXR5 827 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 MAN1B1Q9UKM7 699 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 KIF20BQ96Q89 1820 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 RGS16O15492 202 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 N4BP1O75113 896 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 GNGT1P63211 74 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 GOLGA8FQ08AF8 430 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 GOLGA8DPQ0D2H9 430 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 DHTKD1Q96HY7 919 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 AK8Q96MA6 479 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 STK10O94804 968 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 POLR2MP0CAP2 368 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 RBL2Q08999 1139 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 SLC35F6Q8N357 371 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 COBLO75128 1261 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 ICA1Q05084 483 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 ITIH3Q06033 890 aa16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-202ENST00000553709 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 NR5A1Q13285 461 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 SMYD4Q8IYR2 804 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 LCORLQ8N3X6 602 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPIP5K2O43314 1243 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PRKAB2O43741 272 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 SCNN1DP51172 638 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 CRB1P82279 1406 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 NAA25Q14CX7 972 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPANQ9NQ55 473 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PHLPP2Q6ZVD8 1323 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 KRT19P08727 400 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 NEDD9Q14511 834 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 SLFN13Q68D06 897 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 NLRP10Q86W26 655 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms