RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 LAD1O00515 517 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 MYO1BO43795 1136 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 NMT2O60551 498 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 ZNF202O95125 648 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 TTLL1O95922 423 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 PFKFB1P16118 471 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GNA11P29992 359 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 ZNF165P49910 485 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 NDUFA8P51970 172 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 WNT7BP56706 349 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 NLRP5P59047 1200 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 DHX8Q14562 1220 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 CAMK4Q16566 473 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 CT47A1Q5JQC4 288 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 ARL6IP4Q66PJ3 421 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 METTL16Q86W50 562 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 CEP57L1Q8IYX8 460 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 RNF214Q8ND24 703 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 TNFRSF25Q93038 417 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GLT8D2Q9H1C3 349 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GOLPH3LQ9H4A5 285 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GJB4Q9NTQ9 266 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 BARHL2Q9NY43 387 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 VPS54Q9P1Q0 977 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 SEC63Q9UGP8 760 aaKnown RBP8.35□□□□□ -1.07
ATXN3-221ENST00000553498 HDAC9Q9UKV0 1011 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 KCNJ14Q9UNX9 436 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 ATRNL1Q5VV63 1379 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 A0A1B0GVL5 298 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 GOLGA6L19H0YKK7 550 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 PPIP5K2O43314 1243 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 CHRNA5P30532 468 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 TOB1P50616 345 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-221ENST00000553498 TPM4P67936 248 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 ANO6Q4KMQ2 910 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 FKBP1CQ5VVH2 108 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 MCTP2Q6DN12 878 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 SHC4Q6S5L8 630 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-221ENST00000553498 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 CKAP2LQ8IYA6 745 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 BLIDQ8IZY5 108 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 MKL1Q969V6 931 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 CEP95Q96GE4 821 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 RIOX1Q9H6W3 641 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 KANSL2Q9H9L4 492 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 DBNDD1Q9H9R9 158 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 CABP5Q9NP86 173 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 NYAP2Q9P242 653 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
ATXN3-221ENST00000553498 FBXO2Q9UK22 296 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-221ENST00000553498 KCNH3Q9ULD8 1083 aa8.34□□□□□ -1.07
ATXN3-221ENST00000553498 EP400Q96L91 3159 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 CASZ1Q86V15 1759 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 ESPNB1AK53 854 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 F8W031 263 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 VIL1P09327 827 aaKnown RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 POLD1P28340 1107 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 MARCKSP29966 332 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 SH3BP2P78314 561 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 ATP2C1P98194 919 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 TRAF1Q13077 416 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 NR5A1Q13285 461 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 PICALMQ13492 652 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 NPY5RQ15761 445 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 AOC3Q16853 763 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 SARM1Q6SZW1 724 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 OLFM4Q6UX06 510 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 KRT25Q7Z3Z0 450 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 TRIML1Q8N9V2 468 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 AGBL3Q8NEM8 1001 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 ZMYND12Q9H0C1 365 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
ATXN3-221ENST00000553498 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 TUBE1Q9UJT0 475 aa8.33□□□□□ -1.08
ATXN3-221ENST00000553498 CCDC194A0A1B0GVG4 234 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 BECN2A8MW95 431 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 UBE2Q2LH0YL09 131 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms