RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 NKX3-2P78367 333 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 DEFB103AP81534 67 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 EVX2Q03828 476 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 TCEAL5Q5H9L2 206 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 SNRNP48Q6IEG0 339 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 ZNF467Q7Z7K2 595 aaPredicted RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 CCDC144CPQ8IYA2 1237 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 FBXO22Q8NEZ5 403 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 PPP1R13LQ8WUF5 828 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 PABPC5Q96DU9 382 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 MRPL38Q96DV4 380 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 POP1Q99575 1024 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 TMX2Q9Y320 296 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 RIPK3Q9Y572 518 aa8.17□□□□□ -1.1
LETMD1-236ENST00000553043 RIF1Q5UIP0 2472 aaKnown RBP8.17□□□□□ -1.1
LETMD1-236ENST00000553043 PROB1E7EW31 1015 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 IPO8O15397 1037 aaKnown RBP8.16□□□□□ -1.1
LETMD1-236ENST00000553043 KDM4AO75164 1064 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 CYP2E1P05181 493 aaPredicted RBP8.16□□□□□ -1.1
LETMD1-236ENST00000553043 GNAI3P08754 354 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 UQCRFS1P1P0C7P4 283 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 SMPD1P17405 629 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 AVPR2P30518 371 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 ICA1Q05084 483 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 SMAD2Q15796 467 aaKnown RBP8.16□□□□□ -1.1
LETMD1-236ENST00000553043 PTPROQ16827 1216 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 TMEM179Q6ZVK1 233 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 SIAH1Q8IUQ4 282 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 ANKRD35Q8N283 1001 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 BANK1Q8NDB2 785 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 REPS2Q8NFH8 660 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.16□□□□□ -1.1
LETMD1-236ENST00000553043 FGD4Q96M96 766 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 CNTNAP3BQ96NU0 1288 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 RAD9AQ99638 391 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 CNTNAP3Q9BZ76 1288 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 KATNBL1Q9H079 304 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 CTNNA3Q9UI47 895 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 PPP1R9AQ9ULJ8 1098 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
LETMD1-236ENST00000553043 CFAP54Q96N23 3096 aa8.16□□□□□ -1.1
LETMD1-236ENST00000553043 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 STXBP3O00186 592 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 GJB5O95377 273 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 ZXDAP98168 799 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 GABPAQ06546 454 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 TIGD5Q53EQ6 642 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 TTC39AQ5SRH9 613 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 CPXCR1Q8N123 301 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 MAGEB6Q8N7X4 407 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 SH2D4AQ9H788 454 aa8.15□□□□□ -1.1
LETMD1-236ENST00000553043 EPG5Q9HCE0 2579 aa8.15□□□□□ -1.11
LETMD1-236ENST00000553043 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 COL4A6Q14031 1691 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 MBTPS2O43462 519 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 IDH1O75874 414 aaKnown RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 MYL3P08590 195 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 AKR1B1P15121 316 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 LTBRP36941 435 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 RARSP54136 660 aaKnown RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 CNTN2Q02246 1040 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 DLX2Q07687 328 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 FAM83BQ5T0W9 1011 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 DGLUCYQ7Z3D6 616 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 ADSSL1Q8N142 457 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 PIH1D3Q9NQM4 214 aaKnown RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 PDGFCQ9NRA1 345 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
LETMD1-236ENST00000553043 DDX49Q9Y6V7 483 aaKnown RBP8.14□□□□□ -1.11
LETMD1-236ENST00000553043 FAM186AA6NE01 2351 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 EEF2P13639 858 aaKnown RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 ZAP70P43403 619 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 SIGLEC14Q08ET2 396 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 GPM6BQ13491 265 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 BFSP2Q13515 415 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 EPC2Q52LR7 807 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 CERS3Q8IU89 383 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 DYNLL2Q96FJ2 89 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 ZNF512BQ96KM6 892 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 NUP88Q99567 741 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 RAVER2Q9HCJ3 691 aaKnown RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 MCM9Q9NXL9 1143 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 NOD1Q9Y239 953 aa8.13□□□□□ -1.11
LETMD1-236ENST00000553043 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-236ENST00000553043 TRANK1O15050 2925 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms