RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZEB2O60315 1214 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 B4GALT4O60513 344 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 PTGS1P23219 599 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 TDO2P48775 406 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 RPUSD2Q8IZ73 545 aaKnown RBP20.13■□□□□ 0.81
CACNB3-222ENST00000552465 NEDD1Q8NHV4 660 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 WNT8AQ9H1J5 351 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-222ENST00000552465 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 SLC4A7Q9Y6M7 1214 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 GPAA1O43292 621 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 APPP05067 770 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 GNAT2P19087 354 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 STAT2P52630 851 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 TKFCQ3LXA3 575 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 FAM160B2Q86V87 743 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 CHURC1Q8WUH1 139 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 STAG1Q8WVM7 1258 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 VWCEQ96DN2 955 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
CACNB3-222ENST00000552465 PDGFCQ9NRA1 345 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 Q9Y3F1 56 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 PCDHA11Q9Y5I1 949 aa20.12■□□□□ 0.81
CACNB3-222ENST00000552465 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
CACNB3-222ENST00000552465 BMP1P13497 986 aa20.11■□□□□ 0.81
CACNB3-222ENST00000552465 MYOGP15173 224 aa20.11■□□□□ 0.81
CACNB3-222ENST00000552465 PSMC6P62333 389 aa20.11■□□□□ 0.81
CACNB3-222ENST00000552465 PPP2R2DQ66LE6 453 aa20.11■□□□□ 0.81
CACNB3-222ENST00000552465 TAPT1Q6NXT6 567 aa20.11■□□□□ 0.81
CACNB3-222ENST00000552465 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
CACNB3-222ENST00000552465 MCM3APO60318 1980 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
CACNB3-222ENST00000552465 M0R2C6 588 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 TSPY3P0CV98 308 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 TSPY8P0CW00 308 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 ALAS1P13196 640 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 TMEM63BQ5T3F8 832 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 GMCL1Q96IK5 515 aa20.1■□□□□ 0.81
CACNB3-222ENST00000552465 PLIN4Q96Q06 1357 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 PLA2G6O60733 806 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 ZFYP08048 801 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-222ENST00000552465 MCCP23508 829 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 SLC1A4P43007 532 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 TFAP4Q01664 338 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 IKQ13123 557 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-222ENST00000552465 EEPD1Q7L9B9 569 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 FBXO16Q8IX29 292 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-222ENST00000552465 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 SCLYQ96I15 445 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 NECAB3Q96P71 396 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-222ENST00000552465 ALDH8A1Q9H2A2 487 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-222ENST00000552465 MYH7P12883 1935 aa20.09■□□□□ 0.81
CACNB3-222ENST00000552465 ZBBXA8MT70 800 aa20.08■□□□□ 0.81
CACNB3-222ENST00000552465 ATP2A2P16615 1042 aaKnown RBP20.08■□□□□ 0.81
CACNB3-222ENST00000552465 PDE4BQ07343 736 aa20.08■□□□□ 0.81
CACNB3-222ENST00000552465 MUM1L1Q5H9M0 696 aa20.08■□□□□ 0.81
CACNB3-222ENST00000552465 CHMP4CQ96CF2 233 aa20.08■□□□□ 0.81
CACNB3-222ENST00000552465 CYP39A1Q9NYL5 469 aa20.08■□□□□ 0.81
CACNB3-222ENST00000552465 MYO9BQ13459 2157 aa20.08■□□□□ 0.8
CACNB3-222ENST00000552465 PLA2G5P39877 138 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 SNAP25P60880 206 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 TFF2Q03403 129 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 TTLL4Q14679 1199 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 AAK1Q2M2I8 961 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 RCSD1Q6JBY9 416 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 KIAA1211Q6ZU35 1233 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 MORC4Q8TE76 937 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 NACAP1Q9BZK3 213 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 VTA1Q9NP79 307 aa20.07■□□□□ 0.8
CACNB3-222ENST00000552465 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
CACNB3-222ENST00000552465 PFKMP08237 780 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 POU3F3P20264 500 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-222ENST00000552465 DUSP28Q4G0W2 176 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 PURBQ96QR8 312 aaKnown RBP20.06■□□□□ 0.8
CACNB3-222ENST00000552465 C1QTNF1Q9BXJ1 281 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
CACNB3-222ENST00000552465 PRR12Q9ULL5 1215 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 MUC3AQ02505 3323 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 MYH4Q9Y623 1939 aa20.06■□□□□ 0.8
CACNB3-222ENST00000552465 ERC2O15083 957 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 CYP2C9P11712 490 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 PPARAQ07869 468 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 TMEM67Q5HYA8 995 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 NSMFQ6X4W1 530 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 FAM122AQ96E09 287 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 GPATCH3Q96I76 525 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 CHD9Q3L8U1 2897 aa20.05■□□□□ 0.8
CACNB3-222ENST00000552465 RFXAPO00287 272 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 KCNQ1P51787 676 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 SKIV2LQ15477 1246 aaKnown RBP20.04■□□□□ 0.8
CACNB3-222ENST00000552465 PPP4R3BQ5MIZ7 849 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 DEFB128Q7Z7B8 93 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 SEC62Q99442 399 aaKnown RBP20.04■□□□□ 0.8
CACNB3-222ENST00000552465 POLR3EQ9NVU0 708 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms