RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 USP26Q9BXU7 913 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 MYH6P13533 1939 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 ABCB11O95342 1321 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 PTPDC1A2A3K4 754 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 TFRCP02786 760 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 CAPN2P17655 700 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 CCND3P30281 292 aaPredicted RBP21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 EXOSC10Q01780 885 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 SGMS1Q86VZ5 419 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 MICU3Q86XE3 530 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 FBXO11Q86XK2 927 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 HOMER1Q86YM7 354 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 MSL3Q8N5Y2 521 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 CNPY2Q9Y2B0 182 aa21.47■■□□□ 1.03
PRPF40B-216ENST00000552301 NFIBO00712 420 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 CYBAP13498 195 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 RXRAP19793 462 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 CASTP20810 708 aaKnown RBP21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 TRAF1Q13077 416 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 ZNF467Q7Z7K2 595 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 AMNQ9BXJ7 453 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 CYP39A1Q9NYL5 469 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 NRBP1Q9UHY1 535 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 NAP1L2Q9ULW6 460 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 SMCHD1A6NHR9 2005 aa21.46■■□□□ 1.03
PRPF40B-216ENST00000552301 ZBTB5O15062 677 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 MSCO60682 206 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 RAB11FIP4Q86YS3 637 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 CCDC144CPQ8IYA2 1237 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 FAM133AQ8N9E0 248 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 SHISA4Q96DD7 197 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 RIOX1Q9H6W3 641 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 MRPL11Q9Y3B7 192 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 SYNGAP1Q96PV0 1343 aa21.45■■□□□ 1.02
PRPF40B-216ENST00000552301 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 TNRC18O15417 2968 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 ZBTB43O43298 467 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 IGHA2P01877 340 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 CPA1P15085 419 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 RPS6KB1P23443 525 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 CNTN2Q02246 1040 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 BAATQ14032 418 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 APOA5Q6Q788 366 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 RNF207Q6ZRF8 634 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 CLEC4DQ8WXI8 215 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 PIGSQ96S52 555 aa21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 SEC63Q9UGP8 760 aaKnown RBP21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 DDX20Q9UHI6 824 aaKnown RBP21.44■■□□□ 1.02
PRPF40B-216ENST00000552301 KLF18A0A0U1RQI7 1052 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 FARP2O94887 1054 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 CALML3P27482 149 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 PRAMEF19Q5SWL8 479 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 MAMDC4Q6UXC1 1216 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 Q6ZUG5 572 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 MCF2L2Q86YR7 1114 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 TRPV1Q8NER1 839 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 MTMR8Q96EF0 704 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 RRP36Q96EU6 259 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 SPZ1Q9BXG8 430 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 CRISPLD2Q9H0B8 497 aa21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 ADD3Q9UEY8 706 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 ZHX1Q9UKY1 873 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-216ENST00000552301 CENPFP49454 3210 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 ASB14A6NK59 587 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 SEPT4O43236 478 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 SLC30A10Q6XR72 485 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 ARMCX2Q7L311 632 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 FANCBQ8NB91 859 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 RBM28Q9NW13 759 aaKnown RBP21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 PCDHA1Q9Y5I3 950 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 CYP46A1Q9Y6A2 500 aa21.42■■□□□ 1.02
PRPF40B-216ENST00000552301 PNMA6FA0A0J9YX94 578 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 CYTH3O43739 400 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 PLEKHA8P1O95397 391 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 SMARCA1P28370 1054 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 RPS6P62753 249 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 RTN1Q16799 776 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 BRF1Q92994 677 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 FGD4Q96M96 766 aa21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 MPHOSPH6Q99547 160 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-216ENST00000552301 MCM3APO60318 1980 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 SOWAHBA6NEL2 793 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 RCAN1P53805 252 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 SLC35G1Q2M3R5 365 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 RUFY3Q7L099 469 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 RGS22Q8NE09 1264 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 TM6SF1Q9BZW5 370 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 MAF1Q9H063 256 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 ABHD16BQ9H3Z7 469 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 OGDHLQ9ULD0 1010 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
PRPF40B-216ENST00000552301 B4DLN1 442 aa21.39■■□□□ 1.01
PRPF40B-216ENST00000552301 SNAI1O95863 264 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms