RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 VCAM1P19320 739 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 CTHP32929 405 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 IRS1P35568 1242 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 NR5A1Q13285 461 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 MVPQ14764 893 aaKnown RBP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 C1orf53Q5VUE5 145 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 OLFML2BQ68BL8 750 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 CATSPERGQ6ZRH7 1159 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 FOXP4Q8IVH2 680 aaPredicted RBP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 SPATA5Q8NB90 893 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 ACER1Q8TDN7 264 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 TGFBRAP1Q8WUH2 860 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 C12orf42Q96LP6 360 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 MOV10L1Q9BXT6 1211 aaKnown RBP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 PBX4Q9BYU1 374 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 AATFQ9NY61 560 aaKnown RBP eCLIP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 SAP30BPQ9UHR5 308 aaKnown RBP6.6□□□□□ -1.35
HOXB3-213ENST00000552000 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 HCN4Q9Y3Q4 1203 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 PTPRCP08575 1304 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 FLT1P17948 1338 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 COBLO75128 1261 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 PGK1P00558 417 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 USP14P54578 494 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
HOXB3-213ENST00000552000 FOXK2Q01167 660 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 TFCP2Q12800 502 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 RAB3GAP1Q15042 981 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 XP32Q5T750 250 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 GORABQ5T7V8 394 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 METTL16Q86W50 562 aaKnown RBP6.59□□□□□ -1.35
HOXB3-213ENST00000552000 MICALL1Q8N3F8 863 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 SLC44A5Q8NCS7 719 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 PRR7Q8TB68 274 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 NEUROD6Q96NK8 337 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 LRFN3Q9BTN0 628 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 EPHX3Q9H6B9 360 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 RPAP3Q9H6T3 665 aaPredicted RBP6.59□□□□□ -1.35
HOXB3-213ENST00000552000 COPRSQ9NQ92 184 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 XPNPEP3Q9NQH7 507 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 FAM217BQ9NTX9 383 aaPredicted RBP6.59□□□□□ -1.35
HOXB3-213ENST00000552000 LRP2BPQ9P2M1 347 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 PCDHGC3Q9UN70 934 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 ZNF236Q9UL36 1845 aa6.59□□□□□ -1.35
HOXB3-213ENST00000552000 SPTBN2O15020 2390 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 A0A1W2PQ45 241 aaPredicted RBP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 A0A1W2PQY0 241 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 DCDC2CA8MYV0 355 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 SPTLC1O15269 473 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 STRNO43815 780 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 BAG3O95817 575 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 TIMP1P01033 207 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 HLA-DOAP06340 250 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 ACRP10323 421 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 RARBP10826 455 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 ERCC3P19447 782 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 KRT76Q01546 638 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 TFF2Q03403 129 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 AGERQ15109 404 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 TMEM240Q5SV17 173 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 NAA16Q6N069 864 aaPredicted RBP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 KANK3Q6NY19 840 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 ATF7IPQ6VMQ6 1270 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 C16orf59Q7L2K0 433 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 RNF180Q86T96 592 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 LENG1Q96BZ8 264 aaPredicted RBP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 CDK15Q96Q40 435 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 SPATC1LQ9H0A9 340 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 KIAA1683Q9H0B3 1180 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 NKX2-4Q9H2Z4 354 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 SNRKQ9NRH2 765 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 SLC5A4Q9NY91 659 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 CXXC1Q9P0U4 656 aaPredicted RBP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 MSRAQ9UJ68 235 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 DNMT3LQ9UJW3 386 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 AKAP2Q9Y2D5 859 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.58□□□□□ -1.36
HOXB3-213ENST00000552000 TET1Q8NFU7 2136 aa6.58□□□□□ -1.36
HOXB3-213ENST00000552000 APBB1O00213 710 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 TAL1P17542 331 aaPredicted RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 ARID4AP29374 1257 aaPredicted RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 MCAMP43121 646 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 KCNQ1P51787 676 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 DYNLL1P63167 89 aaKnown RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 PPIGQ13427 754 aaKnown RBP eCLIP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 PLS1Q14651 629 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 SKIV2LQ15477 1246 aaKnown RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 TMEM31Q5JXX7 168 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 MFSD5Q6N075 450 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 CCDC174Q6PII3 467 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF365Q70YC5 407 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms