RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MAF1Q9H063 256 aa17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 SEPT4O43236 478 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 COL9A3Q14050 684 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 DHX32Q7L7V1 743 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 SGMS1Q86VZ5 419 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 MTMR8Q96EF0 704 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 FGD4Q96M96 766 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 CNPY2Q9Y2B0 182 aa17.95■□□□□ 0.46
PRPF40B-211ENST00000551063 NFIBO00712 420 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 KIF5BP33176 963 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 LHX8Q68G74 356 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 ABCB11O95342 1321 aa17.94■□□□□ 0.46
PRPF40B-211ENST00000551063 CALM1P0DP23 149 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 CALM2P0DP24 149 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 CALM3P0DP25 149 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 CNGA1P29973 690 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 FXR1P51114 621 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 EXOSC10Q01780 885 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 RIOX1Q9H6W3 641 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
PRPF40B-211ENST00000551063 LOC102724159A0A0B4J2E5 919 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 ASB14A6NK59 587 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 ZBTB5O15062 677 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 SMARCA1P28370 1054 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 GNAQP50148 359 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 CNTN2Q02246 1040 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 TRAF1Q13077 416 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 PWP2Q15269 919 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 SLC35G1Q2M3R5 365 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 USH1GQ495M9 461 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 ARMCX2Q7L311 632 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 FBXO11Q86XK2 927 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 AMNQ9BXJ7 453 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 ADD3Q9UEY8 706 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-211ENST00000551063 SOWAHBA6NEL2 793 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 EVI5O60447 810 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 EIF5BO60841 1220 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 ZNF865P0CJ78 1059 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 PRAMEF19Q5SWL8 479 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 RNF207Q6ZRF8 634 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 SPZ1Q9BXG8 430 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 MRPL11Q9Y3B7 192 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-211ENST00000551063 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 CYTH3O43739 400 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 AKR1A1P14550 325 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 PSMA5P28066 241 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 RCAN1P53805 252 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 RPS6P62753 249 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 NECAB2Q7Z6G3 386 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 MCF2L2Q86YR7 1114 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 CCDC144CPQ8IYA2 1237 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 ASTN1O14525 1302 aa17.9■□□□□ 0.46
PRPF40B-211ENST00000551063 GHRHRQ02643 423 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 ACVR2BQ13705 512 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 APOA5Q6Q788 366 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 MORC4Q8TE76 937 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 PIGSQ96S52 555 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 KATNBL1Q9H079 304 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 CEP290O15078 2479 aa17.89■□□□□ 0.45
PRPF40B-211ENST00000551063 ZNFX1Q9P2E3 1918 aaKnown RBP17.88■□□□□ 0.45
PRPF40B-211ENST00000551063 PNMA6FA0A0J9YX94 578 aa17.88■□□□□ 0.45
PRPF40B-211ENST00000551063 DNM1LO00429 736 aa17.88■□□□□ 0.45
PRPF40B-211ENST00000551063 PPP1R11O60927 126 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-211ENST00000551063 RARBP10826 455 aa17.88■□□□□ 0.45
PRPF40B-211ENST00000551063 CALML3P27482 149 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms