RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PRKCQQ04759 706 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 PRSS53Q2L4Q9 553 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
LIMA1-205ENST00000550592 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 GSTCDQ8NEC7 633 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 DCAF4Q8WV16 495 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 ASB11Q8WXH4 323 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 HRASLS5Q96KN8 279 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 BRINP2Q9C0B6 783 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 ATP13A1Q9HD20 1204 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 GPRC5CQ9NQ84 441 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 ZNF281Q9Y2X9 895 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 PCDHA11Q9Y5I1 949 aa7.01□□□□□ -1.29
LIMA1-205ENST00000550592 BLACEA4D250 179 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 ARNTLO00327 626 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 EFCAB14O75071 495 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 TGFB1P01137 390 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 VIL1P09327 827 aaKnown RBP7□□□□□ -1.29
LIMA1-205ENST00000550592 GSTM1P09488 218 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 SEPHS1P49903 392 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 TEKQ02763 1124 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 PTPROQ16827 1216 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 AOC3Q16853 763 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 MSMPQ1L6U9 139 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 STYK1Q6J9G0 422 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 MAMDC2Q7Z304 686 aaPredicted RBP7□□□□□ -1.29
LIMA1-205ENST00000550592 CREG2Q8IUH2 290 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 DHX37Q8IY37 1157 aaKnown RBP7□□□□□ -1.29
LIMA1-205ENST00000550592 SLC7A14Q8TBB6 771 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 MFSD3Q96ES6 412 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 MISP3Q96FF7 219 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 TRIM39Q9HCM9 518 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 INTS7Q9NVH2 962 aaKnown RBP7□□□□□ -1.29
LIMA1-205ENST00000550592 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
LIMA1-205ENST00000550592 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
LIMA1-205ENST00000550592 FURINP09958 794 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 LTKP29376 864 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 E4F1Q66K89 784 aaPredicted RBP6.99□□□□□ -1.29
LIMA1-205ENST00000550592 INTS5Q6P9B9 1019 aaKnown RBP6.99□□□□□ -1.29
LIMA1-205ENST00000550592 USP53Q70EK8 1073 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 SLC52A2Q9HAB3 445 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
LIMA1-205ENST00000550592 A0A087X0B3 334 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 FGF10O15520 208 aaPredicted RBP6.98□□□□□ -1.29
LIMA1-205ENST00000550592 PLS3P13797 630 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 EGR3Q06889 387 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 IQCEQ6IPM2 695 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 RSPO2Q6UXX9 243 aaPredicted RBP6.98□□□□□ -1.29
LIMA1-205ENST00000550592 PPIL6Q8IXY8 311 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 ZCRB1Q8TBF4 217 aaKnown RBP6.98□□□□□ -1.29
LIMA1-205ENST00000550592 MMP19Q99542 508 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 ZFYVE21Q9BQ24 234 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
LIMA1-205ENST00000550592 LMCD1Q9NZU5 365 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 CLEC1BQ9P126 229 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 NDOR1Q9UHB4 597 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 TMEFF2Q9UIK5 374 aaPredicted RBP6.98□□□□□ -1.29
LIMA1-205ENST00000550592 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
LIMA1-205ENST00000550592 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 IRS4O14654 1257 aaPredicted RBP6.97□□□□□ -1.29
LIMA1-205ENST00000550592 MEFVO15553 781 aaPredicted RBP6.97□□□□□ -1.29
LIMA1-205ENST00000550592 FKTNO75072 461 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 PAMP19021 973 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 SDSP20132 328 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 LTBRP36941 435 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 GRIK1P39086 918 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 KSR1Q8IVT5 923 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 CCDC103Q8IW40 242 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 ANKRD13AQ8IZ07 590 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 SCLYQ96I15 445 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 PTCHD1Q96NR3 888 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 CDADC1Q9BWV3 514 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 GPR27Q9NS67 375 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 BICRAQ9NZM4 1560 aa6.97□□□□□ -1.29
LIMA1-205ENST00000550592 MAGEC2Q9UBF1 373 aaPredicted RBP6.97□□□□□ -1.29
LIMA1-205ENST00000550592 UNC13AQ9UPW8 1703 aa6.96□□□□□ -1.29
LIMA1-205ENST00000550592 AQP7O14520 342 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 COBLO75128 1261 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 DNAJC8O75937 253 aaPredicted RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 MYCLP1P12525 358 aaPredicted RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 RPL10P27635 214 aaKnown RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 KCNAB2Q13303 367 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 KCNT2Q6UVM3 1135 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 ZPBP2Q6X784 338 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 TMEM52Q8NDY8 209 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 BCL7CQ8WUZ0 217 aaPredicted RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 MAGEB10Q96LZ2 347 aaPredicted RBP6.96□□□□□ -1.3
LIMA1-205ENST00000550592 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms