RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 CCL23P55773 120 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 CCDC85BQ15834 202 aaPredicted RBP20.38■□□□□ 0.85
HCFC2-205ENST00000550444 LRRFIP1Q32MZ4 808 aaKnown RBP20.38■□□□□ 0.85
HCFC2-205ENST00000550444 EEPD1Q7L9B9 569 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 SEC62Q99442 399 aaKnown RBP20.38■□□□□ 0.85
HCFC2-205ENST00000550444 NAPBQ9H115 298 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 NKX2-4Q9H2Z4 354 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 HIPK3Q9H422 1215 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 CXXC1Q9P0U4 656 aaPredicted RBP20.38■□□□□ 0.85
HCFC2-205ENST00000550444 MTMR7Q9Y216 660 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 ZNF536O15090 1300 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 ZEB2O60315 1214 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 CABYRO75952 493 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 PPARAQ07869 468 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 ITGA7Q13683 1181 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 RAB30Q15771 203 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 FSCN1Q16658 493 aaKnown RBP20.37■□□□□ 0.85
HCFC2-205ENST00000550444 KCTD1Q719H9 257 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 OTOP2Q7RTS6 562 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 HERVK_113Q902F9 699 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 MTIF3Q9H2K0 278 aaKnown RBP20.37■□□□□ 0.85
HCFC2-205ENST00000550444 DCTPP1Q9H773 170 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 PDGFCQ9NRA1 345 aa20.37■□□□□ 0.85
HCFC2-205ENST00000550444 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
HCFC2-205ENST00000550444 SPTBN5Q9NRC6 3674 aaKnown RBP20.37■□□□□ 0.85
HCFC2-205ENST00000550444 UMODL1Q5DID0 1318 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 TNFRSF10AO00220 468 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 SMPD1P17405 629 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 NKX3-2P78367 333 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 TKFCQ3LXA3 575 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 TRPV6Q9H1D0 765 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 STX8Q9UNK0 236 aa20.36■□□□□ 0.85
HCFC2-205ENST00000550444 PSMC6P62333 389 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 ADGRE1Q14246 886 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 MUM1L1Q5H9M0 696 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 AKNAD1Q5T1N1 836 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 FBXO16Q8IX29 292 aaPredicted RBP20.35■□□□□ 0.85
HCFC2-205ENST00000550444 SLC43A3Q8NBI5 491 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 SLC28A3Q9HAS3 691 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 INCENPQ9NQS7 918 aa20.35■□□□□ 0.85
HCFC2-205ENST00000550444 PLIN4Q96Q06 1357 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 GRIN2DO15399 1336 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 MYH4Q9Y623 1939 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 TMEM63BQ5T3F8 832 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 RCSD1Q6JBY9 416 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 NSMFQ6X4W1 530 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 ATXN2LQ8WWM7 1075 aaKnown RBP20.34■□□□□ 0.85
HCFC2-205ENST00000550444 FSD1Q9BTV5 496 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 CYP39A1Q9NYL5 469 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 THEGQ9P2T0 379 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 PRR12Q9ULL5 1215 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 YBX2Q9Y2T7 364 aaKnown RBP20.34■□□□□ 0.85
HCFC2-205ENST00000550444 MCM3APO60318 1980 aa20.34■□□□□ 0.85
HCFC2-205ENST00000550444 B4GALT4O60513 344 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 NMT2O60551 498 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 RABGGTBP53611 331 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 PPP4R3BQ5MIZ7 849 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 TAPT1Q6NXT6 567 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 ASB2Q96Q27 587 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 PURBQ96QR8 312 aaKnown RBP20.33■□□□□ 0.85
HCFC2-205ENST00000550444 NOC4LQ9BVI4 516 aaKnown RBP20.33■□□□□ 0.85
HCFC2-205ENST00000550444 CCPG1Q9ULG6 757 aa20.33■□□□□ 0.85
HCFC2-205ENST00000550444 ZBBXA8MT70 800 aa20.32■□□□□ 0.84
HCFC2-205ENST00000550444 ERC2O15083 957 aa20.32■□□□□ 0.84
HCFC2-205ENST00000550444 RASGRP2Q7LDG7 609 aa20.32■□□□□ 0.84
HCFC2-205ENST00000550444 RPUSD2Q8IZ73 545 aaKnown RBP20.32■□□□□ 0.84
HCFC2-205ENST00000550444 PLA2G6O60733 806 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 MRPS5P82675 430 aaKnown RBP20.31■□□□□ 0.84
HCFC2-205ENST00000550444 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 ZMYM1Q5SVZ6 1142 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 SCLYQ96I15 445 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 Q9Y3F1 56 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 SLC4A7Q9Y6M7 1214 aa20.31■□□□□ 0.84
HCFC2-205ENST00000550444 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 RANBP6O60518 1105 aaKnown RBP20.3■□□□□ 0.84
HCFC2-205ENST00000550444 MICALL1Q8N3F8 863 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 IL27Q8NEV9 243 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
HCFC2-205ENST00000550444 SEZ6LQ9BYH1 1024 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 WNT8AQ9H1J5 351 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 VTA1Q9NP79 307 aa20.3■□□□□ 0.84
HCFC2-205ENST00000550444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.3■□□□□ 0.84
HCFC2-205ENST00000550444 MYOGP15173 224 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 COL9A1P20849 921 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 SLC16A2P36021 539 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 BAATQ14032 418 aaPredicted RBP20.29■□□□□ 0.84
HCFC2-205ENST00000550444 PPP2R2DQ66LE6 453 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 ADAMTS19Q8TE59 1207 aa20.29■□□□□ 0.84
HCFC2-205ENST00000550444 MYL3P08590 195 aa20.28■□□□□ 0.84
HCFC2-205ENST00000550444 CYP2C9P11712 490 aa20.28■□□□□ 0.84
HCFC2-205ENST00000550444 WDR11Q9BZH6 1224 aa20.28■□□□□ 0.84
HCFC2-205ENST00000550444 ALDH8A1Q9H2A2 487 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms