RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 GALNT17Q6IS24 598 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 PPP1R18Q6NYC8 613 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-216ENST00000550391 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 ATP6V1DQ9Y5K8 247 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 TRIOBPQ9H2D6 2365 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 COL6A3P12111 3177 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 ZNF536O15090 1300 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 ESYT2A0FGR8 921 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 SPDYE16A6NNV3 312 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-216ENST00000550391 VWA5AO00534 786 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 ZBED4O75132 1171 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 CCL15Q16663 113 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 TNPO1Q92973 898 aaKnown RBP16.21■□□□□ 0.19
CACNB3-216ENST00000550391 ZMYND12Q9H0C1 365 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-216ENST00000550391 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
CACNB3-216ENST00000550391 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-216ENST00000550391 TESPA1A2RU30 521 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 FKTNO75072 461 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 ICAM1P05362 532 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 OSBPP22059 807 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 GNA11P29992 359 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 KRT2P35908 639 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 GNL2Q13823 731 aaKnown RBP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 ANKRD23Q86SG2 305 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 DIS3L2Q8IYB7 885 aaKnown RBP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 BRI3BPQ8WY22 251 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 ASCC2Q9H1I8 757 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-216ENST00000550391 C6orf50Q9HD87 102 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 SLC45A1Q9Y2W3 748 aa16.2■□□□□ 0.18
CACNB3-216ENST00000550391 SMCO2A6NFE2 343 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 OAZ1P54368 228 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-216ENST00000550391 USH1GQ495M9 461 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 LBX2Q6XYB7 198 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 P2RX7Q99572 595 aaKnown RBP16.19■□□□□ 0.18
CACNB3-216ENST00000550391 GLT8D2Q9H1C3 349 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 ABCB11O95342 1321 aa16.19■□□□□ 0.18
CACNB3-216ENST00000550391 RBBP6Q7Z6E9 1792 aaKnown RBP16.18■□□□□ 0.18
CACNB3-216ENST00000550391 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-216ENST00000550391 BTBD19C9JJ37 291 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 M0R2N6 131 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 ADCY7P51828 1080 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
CACNB3-216ENST00000550391 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 TNFRSF25Q93038 417 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 AGBL1Q96MI9 1066 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 PTPN18Q99952 460 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 RAVER2Q9HCJ3 691 aaKnown RBP16.18■□□□□ 0.18
CACNB3-216ENST00000550391 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
CACNB3-216ENST00000550391 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
CACNB3-216ENST00000550391 BRCA2P51587 3418 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 PDHXO00330 501 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-216ENST00000550391 TM4SF4P48230 202 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 HERVK_113P62684 666 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 NR5A1Q13285 461 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 CLEC17AQ6ZS10 378 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 TEX2Q8IWB9 1127 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 MB21D1Q8N884 522 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 PSTPIP2Q9H939 334 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-216ENST00000550391 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
CACNB3-216ENST00000550391 CENPFP49454 3210 aa16.17■□□□□ 0.18
CACNB3-216ENST00000550391 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
CACNB3-216ENST00000550391 HTTP42858 3142 aa16.16■□□□□ 0.18
CACNB3-216ENST00000550391 OPLAHO14841 1288 aa16.16■□□□□ 0.18
CACNB3-216ENST00000550391 CUL5Q93034 780 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms