RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 TCHHQ07283 1943 aa8.83□□□□□ -1
RNF41-208ENST00000550379 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
RNF41-208ENST00000550379 FRMPD4Q14CM0 1322 aa8.82□□□□□ -1
RNF41-208ENST00000550379 COL11A1P12107 1806 aaPredicted RBP8.82□□□□□ -1
RNF41-208ENST00000550379 SMCO2A6NFE2 343 aa8.82□□□□□ -1
RNF41-208ENST00000550379 H3BQV1 296 aa8.82□□□□□ -1
RNF41-208ENST00000550379 STRNO43815 780 aa8.82□□□□□ -1
RNF41-208ENST00000550379 BMP15O95972 392 aa8.82□□□□□ -1
RNF41-208ENST00000550379 CYP3A4P08684 503 aa8.82□□□□□ -1
RNF41-208ENST00000550379 CIITAP33076 1130 aa8.82□□□□□ -1
RNF41-208ENST00000550379 STAT3P40763 770 aa8.82□□□□□ -1
RNF41-208ENST00000550379 USP11P51784 963 aa8.82□□□□□ -1
RNF41-208ENST00000550379 IRX3P78415 501 aaPredicted RBP8.82□□□□□ -1
RNF41-208ENST00000550379 DEFB115Q30KQ5 88 aa8.82□□□□□ -1
RNF41-208ENST00000550379 IFFO2Q5TF58 517 aa8.82□□□□□ -1
RNF41-208ENST00000550379 XRRA1Q6P2D8 792 aa8.82□□□□□ -1
RNF41-208ENST00000550379 KRT25Q7Z3Z0 450 aa8.82□□□□□ -1
RNF41-208ENST00000550379 DIS3L2Q8IYB7 885 aaKnown RBP8.82□□□□□ -1
RNF41-208ENST00000550379 CCDC82Q8N4S0 544 aa8.82□□□□□ -1
RNF41-208ENST00000550379 TMEM87AQ8NBN3 555 aa8.82□□□□□ -1
RNF41-208ENST00000550379 CLEC4DQ8WXI8 215 aa8.82□□□□□ -1
RNF41-208ENST00000550379 CUL5Q93034 780 aa8.82□□□□□ -1
RNF41-208ENST00000550379 ATG4CQ96DT6 458 aa8.82□□□□□ -1
RNF41-208ENST00000550379 AIFM3Q96NN9 605 aa8.82□□□□□ -1
RNF41-208ENST00000550379 PARK7Q99497 189 aaKnown RBP8.82□□□□□ -1
RNF41-208ENST00000550379 P2RX7Q99572 595 aaKnown RBP8.82□□□□□ -1
RNF41-208ENST00000550379 NAP1L4Q99733 375 aaKnown RBP8.82□□□□□ -1
RNF41-208ENST00000550379 MROH8Q9H579 483 aa8.82□□□□□ -1
RNF41-208ENST00000550379 PSTPIP2Q9H939 334 aa8.82□□□□□ -1
RNF41-208ENST00000550379 ZNF408Q9H9D4 720 aa8.82□□□□□ -1
RNF41-208ENST00000550379 POLR3EQ9NVU0 708 aa8.82□□□□□ -1
RNF41-208ENST00000550379 RBPJLQ9UBG7 517 aa8.82□□□□□ -1
RNF41-208ENST00000550379 ELP1O95163 1332 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CYP3A7-CYP3A51PA0A087WV96 503 aa8.81□□□□□ -1
RNF41-208ENST00000550379 BTBD18B2RXH4 712 aa8.81□□□□□ -1
RNF41-208ENST00000550379 PDHXO00330 501 aa8.81□□□□□ -1
RNF41-208ENST00000550379 LAD1O00515 517 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CA12O43570 354 aa8.81□□□□□ -1
RNF41-208ENST00000550379 TLR2O60603 784 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CNMDO75829 334 aa8.81□□□□□ -1
RNF41-208ENST00000550379 BCRP11274 1271 aa8.81□□□□□ -1
RNF41-208ENST00000550379 GCFC2P16383 781 aaKnown RBP8.81□□□□□ -1
RNF41-208ENST00000550379 CYP3A7P24462 503 aa8.81□□□□□ -1
RNF41-208ENST00000550379 KRT2P35908 639 aa8.81□□□□□ -1
RNF41-208ENST00000550379 NAPAP54920 295 aa8.81□□□□□ -1
RNF41-208ENST00000550379 NLRP5P59047 1200 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CCNA1P78396 465 aa8.81□□□□□ -1
RNF41-208ENST00000550379 PKP1Q13835 747 aa8.81□□□□□ -1
RNF41-208ENST00000550379 TMEM132BQ14DG7 1078 aa8.81□□□□□ -1
RNF41-208ENST00000550379 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
RNF41-208ENST00000550379 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
RNF41-208ENST00000550379 PPP4R3AQ6IN85 833 aa8.81□□□□□ -1
RNF41-208ENST00000550379 HEATR3Q7Z4Q2 680 aa8.81□□□□□ -1
RNF41-208ENST00000550379 IFNL1Q8IU54 200 aa8.81□□□□□ -1
RNF41-208ENST00000550379 REXO1Q8N1G1 1221 aaKnown RBP8.81□□□□□ -1
RNF41-208ENST00000550379 KIFC2Q96AC6 838 aa8.81□□□□□ -1
RNF41-208ENST00000550379 MBOAT7Q96N66 472 aa8.81□□□□□ -1
RNF41-208ENST00000550379 SPATC1LQ9H0A9 340 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CPVLQ9H3G5 476 aa8.81□□□□□ -1
RNF41-208ENST00000550379 VPS54Q9P1Q0 977 aa8.81□□□□□ -1
RNF41-208ENST00000550379 CFAP45Q9UL16 551 aa8.81□□□□□ -1
RNF41-208ENST00000550379 PFASO15067 1338 aa8.8□□□□□ -1
RNF41-208ENST00000550379 RPTORQ8N122 1335 aa8.8□□□□□ -1
RNF41-208ENST00000550379 ZNF236Q9UL36 1845 aa8.8□□□□□ -1
RNF41-208ENST00000550379 DNAJC25-GNG10A0A024R161 153 aa8.8□□□□□ -1
RNF41-208ENST00000550379 STAM2O75886 525 aa8.8□□□□□ -1
RNF41-208ENST00000550379 YEATS4O95619 227 aa8.8□□□□□ -1
RNF41-208ENST00000550379 SREBF1P36956 1147 aa8.8□□□□□ -1
RNF41-208ENST00000550379 NASPP49321 788 aaPredicted RBP8.8□□□□□ -1
RNF41-208ENST00000550379 ADCY7P51828 1080 aa8.8□□□□□ -1
RNF41-208ENST00000550379 IKQ13123 557 aaPredicted RBP8.8□□□□□ -1
RNF41-208ENST00000550379 C17orf99Q6UX52 265 aa8.8□□□□□ -1
RNF41-208ENST00000550379 GADL1Q6ZQY3 521 aa8.8□□□□□ -1
RNF41-208ENST00000550379 NIPA1Q7RTP0 329 aa8.8□□□□□ -1
RNF41-208ENST00000550379 HOMER1Q86YM7 354 aa8.8□□□□□ -1
RNF41-208ENST00000550379 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
RNF41-208ENST00000550379 DNERQ8NFT8 737 aa8.8□□□□□ -1
RNF41-208ENST00000550379 MORC4Q8TE76 937 aa8.8□□□□□ -1
RNF41-208ENST00000550379 SCAND2PQ9GZW5 306 aaPredicted RBP8.8□□□□□ -1
RNF41-208ENST00000550379 VAT1LQ9HCJ6 419 aa8.8□□□□□ -1
RNF41-208ENST00000550379 RTEL1Q9NZ71 1219 aa8.8□□□□□ -1
RNF41-208ENST00000550379 RCOR1Q9UKL0 485 aa8.8□□□□□ -1
RNF41-208ENST00000550379 CCPG1Q9ULG6 757 aa8.8□□□□□ -1
RNF41-208ENST00000550379 PCDHA6Q9UN73 950 aa8.8□□□□□ -1
RNF41-208ENST00000550379 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
RNF41-208ENST00000550379 PCDHA8Q9Y5H6 950 aa8.8□□□□□ -1
RNF41-208ENST00000550379 MYH15Q9Y2K3 1946 aa8.8□□□□□ -1
RNF41-208ENST00000550379 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
RNF41-208ENST00000550379 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
RNF41-208ENST00000550379 TBX3O15119 743 aa8.79□□□□□ -1
RNF41-208ENST00000550379 MAFGO15525 162 aa8.79□□□□□ -1
RNF41-208ENST00000550379 IGHA2P01877 340 aa8.79□□□□□ -1
RNF41-208ENST00000550379 POLR2MP0CAP2 368 aa8.79□□□□□ -1
RNF41-208ENST00000550379 ERVK-9P63128 1117 aa8.79□□□□□ -1
RNF41-208ENST00000550379 ERVK-24P63145 666 aa8.79□□□□□ -1
RNF41-208ENST00000550379 ARL6IP4Q66PJ3 421 aaKnown RBP8.79□□□□□ -1
RNF41-208ENST00000550379 ZNF467Q7Z7K2 595 aaPredicted RBP8.79□□□□□ -1
RNF41-208ENST00000550379 MSL3Q8N5Y2 521 aaKnown RBP8.79□□□□□ -1
RNF41-208ENST00000550379 GPRC5AQ8NFJ5 357 aa8.79□□□□□ -1
RNF41-208ENST00000550379 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms