RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PIGSQ96S52 555 aa13.09□□□□□ -0.31
RAB5B-208ENST00000550283 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
RAB5B-208ENST00000550283 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-208ENST00000550283 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-208ENST00000550283 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 ADCY6O43306 1168 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 DTNBO60941 627 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 REC8O95072 547 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 GJB1P08034 283 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 CYBAP13498 195 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 KCTD2Q14681 263 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 TMEM63BQ5T3F8 832 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 LHX8Q68G74 356 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
RAB5B-208ENST00000550283 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
RAB5B-208ENST00000550283 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
RAB5B-208ENST00000550283 ERICH2A1L162 156 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 FDX1P10109 184 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 LIFRP42702 1097 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 GJA8P48165 433 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 UBXN2AP68543 259 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 OLFML2BQ68BL8 750 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 Q6ZUG5 572 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 SGMS1Q86VZ5 419 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 UPF3BQ9BZI7 483 aaKnown RBP13.07□□□□□ -0.32
RAB5B-208ENST00000550283 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
RAB5B-208ENST00000550283 SGPL1O95470 568 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 ZNF865P0CJ78 1059 aaPredicted RBP13.06□□□□□ -0.32
RAB5B-208ENST00000550283 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
RAB5B-208ENST00000550283 CDC27P30260 824 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 FUT2Q10981 343 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
RAB5B-208ENST00000550283 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
RAB5B-208ENST00000550283 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 MTA3Q9BTC8 594 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 CRISPLD2Q9H0B8 497 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
RAB5B-208ENST00000550283 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
RAB5B-208ENST00000550283 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 KLF18A0A0U1RQI7 1052 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 CCDC69A6NI79 296 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 DHX16O60231 1041 aaKnown RBP13.05□□□□□ -0.32
RAB5B-208ENST00000550283 PPFIA3O75145 1194 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 DDAH1O94760 285 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 COPB2P35606 906 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 KRT32Q14532 448 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 TKFCQ3LXA3 575 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 BRF1Q92994 677 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 MCM3APO60318 1980 aa13.05□□□□□ -0.32
RAB5B-208ENST00000550283 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 CALML3P27482 149 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
RAB5B-208ENST00000550283 MFSD14CQ5VZR4 134 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 MAMDC4Q6UXC1 1216 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 TRMT44Q8IYL2 757 aaKnown RBP13.04□□□□□ -0.32
RAB5B-208ENST00000550283 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 DIS3Q9Y2L1 958 aaKnown RBP13.04□□□□□ -0.32
RAB5B-208ENST00000550283 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
RAB5B-208ENST00000550283 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-208ENST00000550283 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 DLL1O00548 723 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 ZBTB5O15062 677 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 ABCB7O75027 752 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 CNGA1P29973 690 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms