RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 SEPT4O43236 478 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 DXOO77932 396 aaKnown RBP14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 SLC25A27O95847 323 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 FCER1AP12319 257 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 ANO1Q5XXA6 986 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 KCTD12Q96CX2 325 aaKnown RBP14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 LBHD1Q9BQE6 289 aaPredicted RBP14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 LRRCC1Q9C099 1032 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 PUS7LQ9H0K6 701 aaKnown RBP14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 KANSL2Q9H9L4 492 aa14.4□□□□□ -0.1
TUBA1B-205ENST00000549870 SMARCA5O60264 1052 aaPredicted RBP14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 SOX11P35716 441 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 MMP16P51512 607 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 RTP1P59025 263 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 COPS2P61201 443 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 SLC39A5Q6ZMH5 540 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 PNMA1Q8ND90 353 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 MAML3Q96JK9 1138 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 MTMR10Q9NXD2 777 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
TUBA1B-205ENST00000549870 KBTBD13C9JR72 458 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 DLL1O00548 723 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 FBXO28Q9NVF7 368 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 MAP10Q9P2G4 905 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 PRKAG2Q9UGJ0 569 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 FKBPLQ9UIM3 349 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 ATP11BQ9Y2G3 1177 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 STXBP5LQ9Y2K9 1186 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 RLFQ13129 1914 aa14.38□□□□□ -0.11
TUBA1B-205ENST00000549870 VWA5AO00534 786 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 STAT3P40763 770 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 LRRC41Q15345 812 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 C20orf194Q5TEA3 1177 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 RIOX2Q8IUF8 465 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 MMP19Q99542 508 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 PPP1R9AQ9ULJ8 1098 aa14.37□□□□□ -0.11
TUBA1B-205ENST00000549870 PGK2P07205 417 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 ADCYAP1R1P41586 468 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 ECHDC1Q9NTX5 307 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 EVA1BQ9NVM1 165 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 ARPP21Q9UBL0 812 aaPredicted RBP14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
TUBA1B-205ENST00000549870 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 KCTD2Q14681 263 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 SNX17Q15036 470 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 ZNF792Q3KQV3 632 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 FAM47AQ5JRC9 791 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 GIMAP6Q6P9H5 292 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 REPS2Q8NFH8 660 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 FRMPD3Q5JV73 1810 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
TUBA1B-205ENST00000549870 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 CCNYL3P0C7X3 344 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 RASA1P20936 1047 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 COPB2P35606 906 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 NR1H3Q13133 447 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 C1orf53Q5VUE5 145 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 FAM109BQ6ICB4 259 aaPredicted RBP14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 OSBP2Q969R2 916 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 PRDM9Q9NQV7 894 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 PRDM5Q9NQX1 630 aaPredicted RBP14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 BAZ2AQ9UIF9 1905 aaKnown RBP14.34□□□□□ -0.11
TUBA1B-205ENST00000549870 F5H6K3 240 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 RARBP10826 455 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 TAL1P17542 331 aaPredicted RBP14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 KLRC3Q07444 240 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 SHHQ15465 462 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 APPBP2Q92624 585 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 BADQ92934 168 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 MTRQ99707 1265 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 SLF1Q9BQI6 1058 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 DCTPP1Q9H773 170 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 PHF24Q9UPV7 400 aa14.33□□□□□ -0.12
TUBA1B-205ENST00000549870 COL6A3P12111 3177 aa14.32□□□□□ -0.12
TUBA1B-205ENST00000549870 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
TUBA1B-205ENST00000549870 ZBBXA8MT70 800 aa14.32□□□□□ -0.12
TUBA1B-205ENST00000549870 ADH1BP00325 375 aa14.32□□□□□ -0.12
TUBA1B-205ENST00000549870 PGK1P00558 417 aa14.32□□□□□ -0.12
TUBA1B-205ENST00000549870 FBXO45P0C2W1 286 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms