RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
LINC00661-204ENST00000549354 LCMT1Q9UIC8 334 aa12.48□□□□□ -0.41
LINC00661-204ENST00000549354 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
LINC00661-204ENST00000549354 TRIM75PA6NK02 468 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 CHRNA5P30532 468 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 BAG6P46379 1132 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 GRM4Q14833 912 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 ZNF444Q8N0Y2 327 aaPredicted RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 PNKPQ96T60 521 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 KCND1Q9NSA2 647 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 ADAM21Q9UKJ8 722 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 STX10O60499 249 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 KIF5BP33176 963 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 ZSCAN26Q16670 478 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 GPR161Q8N6U8 529 aaKnown RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 GJA10Q969M2 543 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 FBXO2Q9UK22 296 aaPredicted RBP12.47□□□□□ -0.41
LINC00661-204ENST00000549354 PSME4Q14997 1843 aa12.47□□□□□ -0.41
LINC00661-204ENST00000549354 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
LINC00661-204ENST00000549354 RNF225M0QZC1 329 aaPredicted RBP12.46□□□□□ -0.41
LINC00661-204ENST00000549354 KIF5CO60282 957 aa12.46□□□□□ -0.41
LINC00661-204ENST00000549354 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
LINC00661-204ENST00000549354 SSBP05455 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00661-204ENST00000549354 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00661-204ENST00000549354 FUT8Q9BYC5 575 aa12.46□□□□□ -0.41
LINC00661-204ENST00000549354 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
LINC00661-204ENST00000549354 TSPY3P0CV98 308 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 TSPY8P0CW00 308 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 MDM2Q00987 491 aaPredicted RBP12.46□□□□□ -0.42
LINC00661-204ENST00000549354 CUL4BQ13620 913 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 NPY5RQ15761 445 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.42
LINC00661-204ENST00000549354 MACROD2A1Z1Q3 448 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 XBP1P17861 261 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 DPYDQ12882 1025 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 TNFRSF25Q93038 417 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 ABCB6Q9NP58 842 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 IGKV6D-41A0A0C4DH26 115 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 GNAQP50148 359 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 NAP1L1P55209 391 aaKnown RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 CYP27A1Q02318 531 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 PFKFB3Q16875 520 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 TTC19Q6DKK2 380 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 FOXR1Q6PIV2 292 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 CHP1Q99653 195 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 MXD3Q9BW11 206 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 PALM3A6NDB9 673 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-204ENST00000549354 ECE2O60344 883 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 PTPREP23469 700 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 SMARCA1P28370 1054 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 ARID5AQ03989 594 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 UBXN1Q04323 297 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 GPS2Q13227 327 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 ZHX3Q9H4I2 956 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
LINC00661-204ENST00000549354 TXLNAP40222 546 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 EHD4Q9H223 541 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 FAN1Q9Y2M0 1017 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 IBSPP21815 317 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-204ENST00000549354 CRKP46108 304 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 KLK7P49862 253 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 TBX2Q13207 712 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms