RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 ASB14A6NK59 587 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
LINC00661-203ENST00000549131 FXR1P51114 621 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC00661-203ENST00000549131 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 USH1GQ495M9 461 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 PNMA2Q9UL42 364 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 ASTN1O14525 1302 aa17.19■□□□□ 0.34
LINC00661-203ENST00000549131 ADCY6O43306 1168 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 ADAMTS4O75173 837 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 PARP1P09874 1014 aaKnown RBP17.18■□□□□ 0.34
LINC00661-203ENST00000549131 MAGEA10P43363 369 aaPredicted RBP17.18■□□□□ 0.34
LINC00661-203ENST00000549131 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
LINC00661-203ENST00000549131 SLC30A10Q6XR72 485 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 PHF24Q9UPV7 400 aa17.18■□□□□ 0.34
LINC00661-203ENST00000549131 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
LINC00661-203ENST00000549131 A0A1W2PQ45 241 aaPredicted RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 A0A1W2PQY0 241 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 E7EWF7 191 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 BAATQ14032 418 aaPredicted RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 FBXO16Q8IX29 292 aaPredicted RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 NCOA7Q8NI08 942 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 PURBQ96QR8 312 aaKnown RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 GDF15Q99988 308 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 KATNBL1Q9H079 304 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 ADD3Q9UEY8 706 aaKnown RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 PRKAG2Q9UGJ0 569 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
LINC00661-203ENST00000549131 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
LINC00661-203ENST00000549131 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
LINC00661-203ENST00000549131 KIAA1217Q5T5P2 1943 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 A0A1W2PPC1 479 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 ERICH2A1L162 156 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 MYADML2A6NDP7 307 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 CALML3P27482 149 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 SART3Q15020 963 aaKnown RBP17.16■□□□□ 0.34
LINC00661-203ENST00000549131 SNX17Q15036 470 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 SEC23AQ15436 765 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
LINC00661-203ENST00000549131 EEPD1Q7L9B9 569 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 CLEC4DQ8WXI8 215 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
LINC00661-203ENST00000549131 PRDM5Q9NQX1 630 aaPredicted RBP17.16■□□□□ 0.34
LINC00661-203ENST00000549131 IFIT3O14879 490 aaKnown RBP17.15■□□□□ 0.34
LINC00661-203ENST00000549131 ALDH5A1P51649 535 aaPredicted RBP17.15■□□□□ 0.34
LINC00661-203ENST00000549131 ACLYP53396 1101 aa17.15■□□□□ 0.34
LINC00661-203ENST00000549131 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
LINC00661-203ENST00000549131 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
LINC00661-203ENST00000549131 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
LINC00661-203ENST00000549131 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 MOXD2PA6NHM9 499 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 WTAPQ15007 396 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 TLK2Q86UE8 772 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 LBHD1Q9BQE6 289 aaPredicted RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 TSEN34Q9BSV6 310 aaKnown RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 UBE2OQ9C0C9 1292 aaKnown RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
LINC00661-203ENST00000549131 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 STARD7Q9NQZ5 370 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 ABCB11O95342 1321 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 LAMA3Q16787 3333 aa17.14■□□□□ 0.33
LINC00661-203ENST00000549131 CST5P28325 142 aaPredicted RBP17.13■□□□□ 0.33
LINC00661-203ENST00000549131 BMP8BP34820 402 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 GJA9P57773 515 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 KCNA10Q16322 511 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
LINC00661-203ENST00000549131 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 NUP133Q8WUM0 1156 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
LINC00661-203ENST00000549131 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
LINC00661-203ENST00000549131 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 VTA1Q9NP79 307 aa17.13■□□□□ 0.33
LINC00661-203ENST00000549131 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 PQBP1O60828 265 aaKnown RBP17.12■□□□□ 0.33
LINC00661-203ENST00000549131 PDE4DQ08499 809 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms