RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 BCAMP50895 628 aa25.76■■□□□ 1.71
NPAS3-206ENST00000548645 SRBD1Q8N5C6 995 aaKnown RBP25.76■■□□□ 1.71
NPAS3-206ENST00000548645 IQCDQ96DY2 449 aa25.76■■□□□ 1.71
NPAS3-206ENST00000548645 RABEP2Q9H5N1 569 aa25.76■■□□□ 1.71
NPAS3-206ENST00000548645 STIM2Q9P246 746 aa25.76■■□□□ 1.71
NPAS3-206ENST00000548645 MAGEB6P1A0A0J9YX57 407 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 ATF3P18847 181 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 KLK7P49862 253 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 NAALADL2Q58DX5 795 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 LRP5O75197 1615 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 IL2RBP14784 551 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 HNRNPH1P31943 449 aaKnown RBP25.75■■□□□ 1.71
NPAS3-206ENST00000548645 CAVIN3Q969G5 261 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 DUSP9Q99956 384 aaKnown RBP25.75■■□□□ 1.71
NPAS3-206ENST00000548645 SH2D4AQ9H788 454 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 HYOU1Q9Y4L1 999 aa25.75■■□□□ 1.71
NPAS3-206ENST00000548645 ATXN2Q99700 1313 aaKnown RBP25.75■■□□□ 1.71
NPAS3-206ENST00000548645 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 BICDL2A1A5D9 508 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 CCDC181Q5TID7 509 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 IFIH1Q9BYX4 1025 aaKnown RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 PCP11498 1178 aaKnown RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 CALML3P27482 149 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 MTIF2P46199 727 aaKnown RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 DTHD1Q6ZMT9 781 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 ALS2CR12Q96Q35 445 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 OSBPL9Q96SU4 736 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 CAPN6Q9Y6Q1 641 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 SMIM22K7EJ46 135 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 NDUFAB1O14561 156 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 ZNF263O14978 683 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 TNFRSF8P28908 595 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 PFKFB3Q16875 520 aaPredicted RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 SPATS2Q86XZ4 545 aaKnown RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 SMCR8Q8TEV9 937 aaPredicted RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 CNOT6LQ96LI5 555 aaKnown RBP25.74■■□□□ 1.71
NPAS3-206ENST00000548645 ERGIC2Q96RQ1 377 aa25.74■■□□□ 1.71
NPAS3-206ENST00000548645 MATR3P43243 847 aaKnown RBP eCLIP25.73■■□□□ 1.71
NPAS3-206ENST00000548645 TTMPQ5BVD1 217 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 ARL8AQ96BM9 186 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 NOC4LQ9BVI4 516 aaKnown RBP25.73■■□□□ 1.71
NPAS3-206ENST00000548645 PCDHA13Q9Y5I0 950 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 CCNE1P24864 410 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 PAFAH1B1P43034 410 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 MNAT1P51948 309 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 SLC7A5Q01650 507 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 FKBP15Q5T1M5 1219 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 TTC19Q6DKK2 380 aaPredicted RBP25.73■■□□□ 1.71
NPAS3-206ENST00000548645 KRT26Q7Z3Y9 468 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 TSEN2Q8NCE0 465 aaKnown RBP25.73■■□□□ 1.71
NPAS3-206ENST00000548645 KBTBD4Q9NVX7 518 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 SAMM50Q9Y512 469 aa25.73■■□□□ 1.71
NPAS3-206ENST00000548645 UBA7P41226 1012 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 NNTQ13423 1086 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 ADGRA1Q86SQ6 560 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 P2RX5Q93086 422 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 CCDC47Q96A33 483 aaKnown RBP25.72■■□□□ 1.71
NPAS3-206ENST00000548645 DUOX1Q9NRD9 1551 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 FBXW10Q5XX13 1052 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 ASAP1Q9ULH1 1129 aa25.72■■□□□ 1.71
NPAS3-206ENST00000548645 KIAA0754O94854 1291 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 HNRNPH3P31942 346 aaKnown RBP25.71■■□□□ 1.71
NPAS3-206ENST00000548645 HAUS3Q68CZ6 603 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 PLAGL2Q9UPG8 496 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 MOCS3O95396 460 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 ZSCAN29Q8IWY8 852 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-206ENST00000548645 CNPY4Q8N129 248 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 MLXIPQ9HAP2 919 aa25.71■■□□□ 1.71
NPAS3-206ENST00000548645 ZNF335Q9H4Z2 1342 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-206ENST00000548645 GLE1Q53GS7 698 aaKnown RBP25.7■■□□□ 1.71
NPAS3-206ENST00000548645 BLIDQ8IZY5 108 aa25.7■■□□□ 1.71
NPAS3-206ENST00000548645 FGRP09769 529 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 C8orf74Q6P047 294 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 NFRKBQ6P4R8 1299 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 CCSER1Q9C0I3 900 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 APBA1Q02410 837 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 PDCLQ13371 301 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 BRIP1Q9BX63 1249 aa25.7■■□□□ 1.7
NPAS3-206ENST00000548645 CYP2D7A0A087X1C5 515 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 PLEKP08567 350 aaPredicted RBP25.69■■□□□ 1.7
NPAS3-206ENST00000548645 PPP1R2P41236 205 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 MIIPQ5JXC2 388 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 TYW1BQ6NUM6 668 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 KCNV1Q6PIU1 500 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 ABCF2Q9UG63 623 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 ADAMTS3O15072 1205 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 KIF11P52732 1056 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 MRPS25P82663 173 aaKnown RBP25.69■■□□□ 1.7
NPAS3-206ENST00000548645 ANKRD40Q6AI12 368 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 OTUD6BQ8N6M0 293 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 PRPF38AQ8NAV1 312 aaKnown RBP25.69■■□□□ 1.7
NPAS3-206ENST00000548645 EEF2KMTQ96G04 330 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 ZIM3Q96PE6 472 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
NPAS3-206ENST00000548645 ANKRD36CQ5JPF3 1778 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 CCDC155Q8N6L0 562 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 RIOK1Q9BRS2 568 aaKnown RBP25.68■■□□□ 1.7
NPAS3-206ENST00000548645 CUEDC2Q9H467 287 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 ARHGAP20Q9P2F6 1191 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 CAPN7Q9Y6W3 813 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms