RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 TFAP4Q01664 338 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 CXCL17Q6UXB2 119 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 FAM160B2Q86V87 743 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 CHURC1Q8WUH1 139 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 STAG1Q8WVM7 1258 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 ATXN2LQ8WWM7 1075 aaKnown RBP10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 HERVK_113Q902F9 699 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 SEZ6LQ9BYH1 1024 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 DCTPP1Q9H773 170 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 A1CFQ9NQ94 594 aaKnown RBP10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 CXXC1Q9P0U4 656 aaPredicted RBP10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 MSRAQ9UJ68 235 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 PLIN4Q96Q06 1357 aa10.08□□□□□ -0.8
R3HDM2-212ENST00000548161 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 DYNC1LI2O43237 492 aaPredicted RBP10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 FGBP02675 491 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 SMPD1P17405 629 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 MCCP23508 829 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 PDE4BQ07343 736 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 ITGA7Q13683 1181 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 ADGRE1Q14246 886 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 RAB30Q15771 203 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 FSCN1Q16658 493 aaKnown RBP10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 IQSEC1Q6DN90 963 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 NACAP1Q9BZK3 213 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 AP5M1Q9H0R1 490 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 HIPK3Q9H422 1215 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
R3HDM2-212ENST00000548161 ZEB2O60315 1214 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 SLC1A4P43007 532 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 RCSD1Q6JBY9 416 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 TAPT1Q6NXT6 567 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 TLK2Q86UE8 772 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 ASB2Q96Q27 587 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 NOC4LQ9BVI4 516 aaKnown RBP10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 MTIF3Q9H2K0 278 aaKnown RBP10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 PDGFCQ9NRA1 345 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 Q9Y3F1 56 aa10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 PRRC2BQ5JSZ5 2229 aaKnown RBP10.06□□□□□ -0.8
R3HDM2-212ENST00000548161 B4GALT4O60513 344 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 ALAS1P13196 640 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 PTGS1P23219 599 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 CCL23P55773 120 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 PPARAQ07869 468 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 IKQ13123 557 aaPredicted RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 MUM1L1Q5H9M0 696 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 TMEM63BQ5T3F8 832 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 OTOP2Q7RTS6 562 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 MORC4Q8TE76 937 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 VWCEQ96DN2 955 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 SEC62Q99442 399 aaKnown RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 NAPBQ9H115 298 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 WNT8AQ9H1J5 351 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 NKX2-4Q9H2Z4 354 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 SLC28A3Q9HAS3 691 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 IL17RBQ9NRM6 502 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 THEGQ9P2T0 379 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 ISY1Q9ULR0 285 aaKnown RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 YBX2Q9Y2T7 364 aaKnown RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
R3HDM2-212ENST00000548161 IGFBP4P22692 258 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 NOVP48745 357 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 SNAP25P60880 206 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 PSMC6P62333 389 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 MRPS5P82675 430 aaKnown RBP10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 KCTD1Q719H9 257 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 CHMP4CQ96CF2 233 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 INCENPQ9NQS7 918 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 STX8Q9UNK0 236 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 SLC4A7Q9Y6M7 1214 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 GBF1Q92538 1859 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 TTC41PQ6P2S7 1318 aa10.04□□□□□ -0.8
R3HDM2-212ENST00000548161 TSPY2A6NKD2 308 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms