RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 RPAP3Q9H6T3 665 aaPredicted RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 COPRSQ9NQ92 184 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDK4-205ENST00000547853 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 SLC27A2O14975 620 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 TIMP1P01033 207 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 RARBP10826 455 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 IGFBP4P22692 258 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 MCAMP43121 646 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 RAB30Q15771 203 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 CCDC129Q6ZRS4 1044 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
CDK4-205ENST00000547853 TGFBRAP1Q8WUH2 860 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 CHAMP1Q96JM3 812 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CDK4-205ENST00000547853 YBX2Q9Y2T7 364 aaKnown RBP11.3□□□□□ -0.6
CDK4-205ENST00000547853 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
CDK4-205ENST00000547853 STRNO43815 780 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 PLCG2P16885 1265 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 ERCC3P19447 782 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 USP14P54578 494 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 RBM10P98175 930 aaKnown RBP11.29□□□□□ -0.6
CDK4-205ENST00000547853 PTH1RQ03431 593 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 TYRO3Q06418 890 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK4-205ENST00000547853 ME3Q16798 604 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 TATDN1Q6P1N9 297 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 PSRC1Q6PGN9 363 aaPredicted RBP11.29□□□□□ -0.6
CDK4-205ENST00000547853 RNF180Q86T96 592 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK4-205ENST00000547853 SNX27Q96L92 541 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 TNMDQ9H2S6 317 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
CDK4-205ENST00000547853 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 SYNRGQ9UMZ2 1314 aa11.29□□□□□ -0.6
CDK4-205ENST00000547853 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 CSF2RAP15509 400 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 ATP5JP18859 108 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 ACLYP53396 1101 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 PPP4CP60510 307 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 TFCP2Q12800 502 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
CDK4-205ENST00000547853 UTP14CQ5TAP6 766 aaKnown RBP11.28□□□□□ -0.6
CDK4-205ENST00000547853 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
CDK4-205ENST00000547853 FSD1Q9BTV5 496 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
CDK4-205ENST00000547853 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 LARGE1O95461 756 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 HLA-DOAP06340 250 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 ACRP10323 421 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 GUCY1A2P33402 732 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 AAK1Q2M2I8 961 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 ZNF365Q70YC5 407 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 TTC6Q86TZ1 520 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 ALYREFQ86V81 257 aaKnown RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 MICALL1Q8N3F8 863 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 EHD4Q9H223 541 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.61
CDK4-205ENST00000547853 MSRAQ9UJ68 235 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
CDK4-205ENST00000547853 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
CDK4-205ENST00000547853 GPR37L1O60883 481 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 BAG3O95817 575 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 ZNF865P0CJ78 1059 aaPredicted RBP11.26□□□□□ -0.61
CDK4-205ENST00000547853 AKR1A1P14550 325 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
CDK4-205ENST00000547853 HERVK_113Q902F9 699 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 GTF3C6Q969F1 213 aa11.26□□□□□ -0.61
CDK4-205ENST00000547853 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
CDK4-205ENST00000547853 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms