RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC59-202ENST00000547758 RAVER2Q9HCJ3 691 aaKnown RBP16.15■□□□□ 0.18
CCDC59-202ENST00000547758 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 PCDHA11Q9Y5I1 949 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 SLC4A7Q9Y6M7 1214 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 LCTP09848 1927 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 ASTN1O14525 1302 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 ERC2O15083 957 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 IFIT2P09913 472 aaKnown RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 SKIV2LQ15477 1246 aaKnown RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 KIFC2Q96AC6 838 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 WNT8AQ9H1J5 351 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 NYAP2Q9P242 653 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 ARPP21Q9UBL0 812 aaPredicted RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 HCN4Q9Y3Q4 1203 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 ARIH1Q9Y4X5 557 aaPredicted RBP16.14■□□□□ 0.17
CCDC59-202ENST00000547758 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
CCDC59-202ENST00000547758 ZBBXA8MT70 800 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 SEC24BO95487 1268 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 CHGBP05060 677 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 RPUSD2Q8IZ73 545 aaKnown RBP16.13■□□□□ 0.17
CCDC59-202ENST00000547758 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 SEZ6LQ9BYH1 1024 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 PIEZO1Q92508 2521 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 GRIN2DO15399 1336 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 MUC6Q6W4X9 2439 aa16.13■□□□□ 0.17
CCDC59-202ENST00000547758 COL4A4P53420 1690 aaPredicted RBP16.12■□□□□ 0.17
CCDC59-202ENST00000547758 B4GALT4O60513 344 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 ATP2A2P16615 1042 aaKnown RBP16.12■□□□□ 0.17
CCDC59-202ENST00000547758 RASA1P20936 1047 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 OAZ1P54368 228 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 UBE3CQ15386 1083 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 FSCN1Q16658 493 aaKnown RBP16.12■□□□□ 0.17
CCDC59-202ENST00000547758 LRFN3Q9BTN0 628 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 TRPV6Q9H1D0 765 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
CCDC59-202ENST00000547758 GNEQ9Y223 722 aaKnown RBP16.12■□□□□ 0.17
CCDC59-202ENST00000547758 GTPBP6O43824 516 aaPredicted RBP16.11■□□□□ 0.17
CCDC59-202ENST00000547758 ZEB2O60315 1214 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 POU3F3P20264 500 aaPredicted RBP16.11■□□□□ 0.17
CCDC59-202ENST00000547758 POTEGQ6S5H5 508 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 FAM133AQ8N9E0 248 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 VWCEQ96DN2 955 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 SCLYQ96I15 445 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 MTCH2Q9Y6C9 303 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 PTPRSQ13332 1948 aa16.11■□□□□ 0.17
CCDC59-202ENST00000547758 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
CCDC59-202ENST00000547758 RFXAPO00287 272 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 CA3P07451 260 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 PFKMP08237 780 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 HAUS7Q99871 368 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
CCDC59-202ENST00000547758 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 COG5Q9UP83 839 aa16.1■□□□□ 0.17
CCDC59-202ENST00000547758 SCN10AQ9Y5Y9 1956 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 IGKV6D-41A0A0C4DH26 115 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 ASB14A6NK59 587 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 DYNC1LI2O43237 492 aaPredicted RBP16.09■□□□□ 0.17
CCDC59-202ENST00000547758 SMPD1P17405 629 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 ATP5JP18859 108 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 PTGS1P23219 599 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 PSMC6P62333 389 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 TTLL4Q14679 1199 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 SBK1Q52WX2 424 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 TMEM31Q5JXX7 168 aa16.09■□□□□ 0.17
CCDC59-202ENST00000547758 A1CFQ9NQ94 594 aaKnown RBP16.09■□□□□ 0.17
CCDC59-202ENST00000547758 SOWAHBA6NEL2 793 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
CCDC59-202ENST00000547758 MKL1Q969V6 931 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
CCDC59-202ENST00000547758 CERS4Q9HA82 394 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 SYNPO2Q9UMS6 1093 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 COG6Q9Y2V7 657 aa16.08■□□□□ 0.16
CCDC59-202ENST00000547758 EPOPA6NHQ4 379 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 MINDY4BA8MYZ0 360 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 TLL1O43897 1013 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 FDX1P10109 184 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 KRT40Q6A162 431 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 DEFB128Q7Z7B8 93 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms