RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PCDHA1Q9Y5I3 950 aa26.8■■□□□ 1.88
SMARCD1-203ENST00000547247 ABCB11O95342 1321 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 PRPF3O43395 683 aaKnown RBP26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 STRNO43815 780 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 GNRH1P01148 92 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 CAP1Q01518 475 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 SSRP1Q08945 709 aaKnown RBP26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 TRIM22Q8IYM9 498 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 SLC26A6Q9BXS9 759 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 ACAD9Q9H845 621 aa26.79■■□□□ 1.88
SMARCD1-203ENST00000547247 ZSWIM8A7E2V4 1837 aa26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 MGAMO43451 1857 aa26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 PPFIA3O75145 1194 aa26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 CCDC83Q8IWF9 413 aa26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 TMX3Q96JJ7 454 aa26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 MRPL11Q9Y3B7 192 aaKnown RBP26.78■■□□□ 1.88
SMARCD1-203ENST00000547247 SMCHD1A6NHR9 2005 aa26.77■■□□□ 1.88
SMARCD1-203ENST00000547247 FCER1AP12319 257 aa26.77■■□□□ 1.88
SMARCD1-203ENST00000547247 PTPREP23469 700 aa26.77■■□□□ 1.88
SMARCD1-203ENST00000547247 HOXD10P28358 340 aa26.77■■□□□ 1.88
SMARCD1-203ENST00000547247 MUM1L1Q5H9M0 696 aa26.77■■□□□ 1.88
SMARCD1-203ENST00000547247 ST3GAL1Q11201 340 aa26.76■■□□□ 1.87
SMARCD1-203ENST00000547247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.76■■□□□ 1.87
SMARCD1-203ENST00000547247 CTU1Q7Z7A3 348 aaKnown RBP26.76■■□□□ 1.87
SMARCD1-203ENST00000547247 CTDNEP1O95476 244 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 KCTD2Q14681 263 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 PFKFB3Q16875 520 aaPredicted RBP26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 ABRAQ8N0Z2 381 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 CLEC4DQ8WXI8 215 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 MMP19Q99542 508 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 SLC15A5A6NIM6 579 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 HEATR3Q7Z4Q2 680 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 TNS4Q8IZW8 715 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 ANKRD35Q8N283 1001 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 NUDT12Q9BQG2 462 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 TRIM17Q9Y577 477 aa26.75■■□□□ 1.87
SMARCD1-203ENST00000547247 hCG_1984214I3L0E3 225 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 NFIBO00712 420 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 DEXIO95424 95 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 SCG2P13521 617 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 GRB14Q14449 540 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 PKN1Q16512 942 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 OTOP1Q7RTM1 612 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 ZNF713Q8N859 430 aaPredicted RBP26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 NSUN7Q8NE18 718 aaKnown RBP26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 SOCS4Q8WXH5 440 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 SNX21Q969T3 373 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 SRRDQ9UH36 339 aa26.74■■□□□ 1.87
SMARCD1-203ENST00000547247 DOCK3Q8IZD9 2030 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 MORN1Q5T089 497 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 WWC2Q6AWC2 1192 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 NSMFQ6X4W1 530 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 GPKOWQ92917 476 aaPredicted RBP eCLIP26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 DDX11Q96FC9 970 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 LLPHQ9BRT6 129 aaKnown RBP26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 A1CFQ9NQ94 594 aaKnown RBP26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 GJD2Q9UKL4 321 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 STK36Q9NRP7 1315 aa26.73■■□□□ 1.87
SMARCD1-203ENST00000547247 ADORA2AP29274 412 aa26.72■■□□□ 1.87
SMARCD1-203ENST00000547247 MCF2L2Q86YR7 1114 aa26.72■■□□□ 1.87
SMARCD1-203ENST00000547247 BARHL2Q9NY43 387 aa26.72■■□□□ 1.87
SMARCD1-203ENST00000547247 PLXNB2O15031 1838 aa26.72■■□□□ 1.87
SMARCD1-203ENST00000547247 PTPDC1A2A3K4 754 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 PRMT2P55345 433 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 PRKCZQ05513 592 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 RGS22Q8NE09 1264 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 MCOLN1Q9GZU1 580 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 MAF1Q9H063 256 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 ORC3Q9UBD5 711 aaPredicted RBP26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 GABRQQ9UN88 632 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 PFASO15067 1338 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 FLT3LGP49771 235 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 MAP2K5Q13163 448 aa26.71■■□□□ 1.87
SMARCD1-203ENST00000547247 K7ELQ4 463 aaPredicted RBP26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 DTNBO60941 627 aa26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 NAPAP54920 295 aa26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 DPP9Q86TI2 863 aa26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 USP6NLQ92738 828 aa26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 CYP39A1Q9NYL5 469 aa26.7■■□□□ 1.86
SMARCD1-203ENST00000547247 STXBP3O00186 592 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 OPLAHO14841 1288 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 JAK2O60674 1132 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 RGS2P41220 211 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 PPP1R18Q6NYC8 613 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 RNF207Q6ZRF8 634 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 HSCBQ8IWL3 235 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 SMARCC2Q8TAQ2 1214 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 SLC5A4Q9NY91 659 aa26.69■■□□□ 1.86
SMARCD1-203ENST00000547247 CFBP00751 764 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 PGK2P07205 417 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 FDPSP14324 419 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 BAATQ14032 418 aaPredicted RBP26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 SAMD3Q8N6K7 520 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 CCDC12Q8WUD4 166 aaPredicted RBP26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 WASF1Q92558 559 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 TBC1D5Q92609 795 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 ZNF236Q9UL36 1845 aa26.68■■□□□ 1.86
SMARCD1-203ENST00000547247 ZNFX1Q9P2E3 1918 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 DNAJC25-GNG10A0A024R161 153 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 POTEB2H3BUK9 544 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms