RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	ALDH1A1	P00352	501 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	CRHR2	Q13324	411 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	USH1G	Q495M9	461 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	SNRNP48	Q6IEG0	339 aa	Known RBP	13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	SPATC1L	Q9H0A9	340 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	CWC22	Q9HCG8	908 aa	Known RBP	13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	SH3GLB2	Q9NR46	395 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	MORF4L1	Q9UBU8	362 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	PNMA2	Q9UL42	364 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	RIPK3	Q9Y572	518 aa		13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.74	□□□□□ -0.21
PFKM-208	ENST00000547148	ABCB11	O95342	1321 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	ESYT2	A0FGR8	921 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	OPLAH	O14841	1288 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	BCR	P11274	1271 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	STAT3	P40763	770 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	FOSB	P53539	338 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	NAPA	P54920	295 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	ERVK-9	P63128	1117 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	ERVK-24	P63145	666 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	NPY5R	Q15761	445 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	FAM110C	Q1W6H9	321 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	RIOX2	Q8IUF8	465 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	FAM177A1	Q8N128	213 aa	Predicted RBP	13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	ANKRD13C	Q8N6S4	541 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	CCDC148	Q8NFR7	591 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	FBXO18	Q8NFZ0	1043 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	CLEC4D	Q8WXI8	215 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	C8orf76	Q96K31	380 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	PHF20	Q9BVI0	1012 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	ZFYVE28	Q9HCC9	887 aa		13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	DAXX	Q9UER7	740 aa	Predicted RBP	13.73	□□□□□ -0.21
PFKM-208	ENST00000547148	COL11A1	P12107	1806 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	TLR2	O60603	784 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	ALAS1	P13196	640 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	PDC	P20941	246 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	SYT1	P21579	422 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	TRAF1	Q13077	416 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148		Q3C1V9	767 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	TKFC	Q3LXA3	575 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	LARP1B	Q659C4	914 aa	Known RBP	13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	KRT40	Q6A162	431 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	C17orf99	Q6UX52	265 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	RGS22	Q8NE09	1264 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	GPRC5A	Q8NFJ5	357 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	CFHR5	Q9BXR6	569 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	ZMYND12	Q9H0C1	365 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	R3HDML	Q9H3Y0	253 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	RNF146	Q9NTX7	359 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	CPA4	Q9UI42	421 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	KCNJ14	Q9UNX9	436 aa		13.72	□□□□□ -0.21
PFKM-208	ENST00000547148	NFIB	O00712	420 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	ADAMTS3	O15072	1205 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	MMP1	P03956	469 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	XBP1	P17861	261 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	GUCY1B3	Q02153	619 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	GHRHR	Q02643	423 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	PLS1	Q14651	629 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	MUM1L1	Q5H9M0	696 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	DAGLB	Q8NCG7	672 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	SHCBP1	Q8NEM2	672 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	TRERF1	Q96PN7	1200 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	HOMER2	Q9NSB8	354 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	RNF186	Q9NXI6	227 aa		13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	MRPL11	Q9Y3B7	192 aa	Known RBP	13.71	□□□□□ -0.21
PFKM-208	ENST00000547148	SMCO2	A6NFE2	343 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	STX6	O43752	255 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	SLC25A27	O95847	323 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	ERCC3	P19447	782 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	COPB2	P35606	906 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	PKP1	Q13835	747 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	TRIM29	Q14134	588 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	CHST13	Q8NET6	341 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	PORCN	Q9H237	461 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	ACAD9	Q9H845	621 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	RIC8A	Q9NPQ8	531 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	PCDHA4	Q9UN74	947 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	MTMR6	Q9Y217	621 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148	MYH6	P13533	1939 aa		13.7	□□□□□ -0.22
PFKM-208	ENST00000547148		H3BQV1	296 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148		M0R2N6	131 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	PIK3CD	O00329	1044 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	CALML3	P27482	149 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	ADCY7	P51828	1080 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	NLRP5	P59047	1200 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	CCNA1	P78396	465 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	GALNT17	Q6IS24	598 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	NCAPG2	Q86XI2	1143 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	TEX2	Q8IWB9	1127 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	DIS3L2	Q8IYB7	885 aa	Known RBP	13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	OXER1	Q8TDS5	423 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	CUL5	Q93034	780 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	TNFRSF25	Q93038	417 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	MROH8	Q9H579	483 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	PSTPIP2	Q9H939	334 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	C6orf50	Q9HD87	102 aa		13.69	□□□□□ -0.22
PFKM-208	ENST00000547148	SAGE1	Q9NXZ1	904 aa		13.69	□□□□□ -0.22

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