RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 SYNPO2Q9UMS6 1093 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 PTPRFP10586 1907 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 TULP2O00295 520 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 SLC16A2P36021 539 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 CCDC144BQ3MJ40 725 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 GPATCH4Q5T3I0 446 aaKnown RBP18.72■□□□□ 0.59
BRF1-208ENST00000546997 CKAP2LQ8IYA6 745 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 GMCL1Q96IK5 515 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 VPS54Q9P1Q0 977 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 CLIC4Q9Y696 253 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 YEATS4O95619 227 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 ME1P48163 572 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 STX1AQ16623 288 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
BRF1-208ENST00000546997 CCAR2Q8N163 923 aaKnown RBP18.71■□□□□ 0.59
BRF1-208ENST00000546997 VAT1LQ9HCJ6 419 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 KCNJ14Q9UNX9 436 aa18.71■□□□□ 0.59
BRF1-208ENST00000546997 SKILP12757 684 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 SCG2P13521 617 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 H2AFXP16104 143 aaPredicted RBP18.7■□□□□ 0.58
BRF1-208ENST00000546997 PTPRAP18433 802 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
BRF1-208ENST00000546997 DGKZQ13574 1117 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
BRF1-208ENST00000546997 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
BRF1-208ENST00000546997 GOLPH3LQ9H4A5 285 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 RIOX1Q9H6W3 641 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 PICK1Q9NRD5 415 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 SMCHD1A6NHR9 2005 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 TRAF5O00463 557 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 TRIM29Q14134 588 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 VGLL4Q14135 290 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 ADALQ6DHV7 355 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 FBXO38Q6PIJ6 1188 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 MOB2Q70IA6 237 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 PIGSQ96S52 555 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 DNAJC25Q9H1X3 360 aa18.7■□□□□ 0.58
BRF1-208ENST00000546997 PPP1R12BO60237 982 aaPredicted RBP18.69■□□□□ 0.58
BRF1-208ENST00000546997 CCZ1BP86790 482 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 CCZ1P86791 482 aaPredicted RBP18.69■□□□□ 0.58
BRF1-208ENST00000546997 SNW1Q13573 536 aaKnown RBP18.69■□□□□ 0.58
BRF1-208ENST00000546997 NAA30Q147X3 362 aaPredicted RBP18.69■□□□□ 0.58
BRF1-208ENST00000546997 STK38Q15208 465 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 NOL9Q5SY16 702 aaKnown RBP18.69■□□□□ 0.58
BRF1-208ENST00000546997 ADGRF4Q8IZF3 695 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 ENGASEQ8NFI3 743 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 KCNG4Q8TDN1 519 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 SH2D4AQ9H788 454 aa18.69■□□□□ 0.58
BRF1-208ENST00000546997 ATP8B1O43520 1251 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 BMP3P12645 472 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 CDK11BP21127 795 aaKnown RBP18.68■□□□□ 0.58
BRF1-208ENST00000546997 CYP2C19P33261 490 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 MTMR2Q13614 643 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 FAM83BQ5T0W9 1011 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 ANO1Q5XXA6 986 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 TYW1BQ6NUM6 668 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 JMJD4Q9H9V9 463 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 SNCAIPQ9Y6H5 919 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 PARP14Q460N5 1801 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 A0A1W2PQ27 194 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 A0A1W2PQ64 194 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 A0A1W2PQD8 194 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 USP17L10C9JJH3 530 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 SPTLC2O15270 562 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 MMP1P03956 469 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 IRX5P78411 483 aaPredicted RBP18.68■□□□□ 0.58
BRF1-208ENST00000546997 SPP2Q13103 211 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 CCDC73Q6ZRK6 1079 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
BRF1-208ENST00000546997 KIAA1683Q9H0B3 1180 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 ZHX2Q9Y6X8 837 aa18.68■□□□□ 0.58
BRF1-208ENST00000546997 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
BRF1-208ENST00000546997 NF2P35240 595 aa18.67■□□□□ 0.58
BRF1-208ENST00000546997 MAP3K9P80192 1104 aa18.67■□□□□ 0.58
BRF1-208ENST00000546997 FAM160A1Q05DH4 1040 aa18.67■□□□□ 0.58
BRF1-208ENST00000546997 SF3A1Q15459 793 aaKnown RBP18.67■□□□□ 0.58
BRF1-208ENST00000546997 ZNF592Q92610 1267 aa18.67■□□□□ 0.58
BRF1-208ENST00000546997 TRIM75PA6NK02 468 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
BRF1-208ENST00000546997 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 ANO10Q9NW15 660 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 SEC63Q9UGP8 760 aaKnown RBP18.66■□□□□ 0.58
BRF1-208ENST00000546997 IREB2P48200 963 aaKnown RBP18.66■□□□□ 0.58
BRF1-208ENST00000546997 TTLL12Q14166 644 aaPredicted RBP18.66■□□□□ 0.58
BRF1-208ENST00000546997 NPY5RQ15761 445 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 OXER1Q8TDS5 423 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 MRPS27Q92552 414 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms