RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NBPF12Q5TAG4 269 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-211ENST00000546304 DCAF15Q66K64 600 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 GIMAP6Q6P9H5 292 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 AMOTL1Q8IY63 956 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 NACAP1Q9BZK3 213 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 NAPBQ9H115 298 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 DHX36Q9H2U1 1008 aaKnown RBP7.54□□□□□ -1.2
PRKDC-211ENST00000546304 MCM9Q9NXL9 1143 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 PALD1Q9ULE6 856 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 PHF24Q9UPV7 400 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 MYH4Q9Y623 1939 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 FAM196BA6NMK8 535 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 POLR3DP05423 398 aaPredicted RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 CYP2D6P10635 497 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 HSPD1P10809 573 aaKnown RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 MX2P20592 715 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 RASA1P20936 1047 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 FKBP1BP68106 108 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 SLC9A9Q8IVB4 645 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 ZDHHC1Q8WTX9 485 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 DSCC1Q9BVC3 393 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 EHD4Q9H223 541 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 GBA2Q9HCG7 927 aaPredicted RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 NDFIP2Q9NV92 336 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 PI4KBQ9UBF8 816 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 HERC5Q9UII4 1024 aaKnown RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 SERPINB13Q9UIV8 391 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 ATXN7L1Q9ULK2 861 aaPredicted RBP7.53□□□□□ -1.2
PRKDC-211ENST00000546304 LOC285556D6RIA3 1793 aa7.53□□□□□ -1.2
PRKDC-211ENST00000546304 CYP2D7A0A087X1C5 515 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L12C9JPN9 530 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L21D6R901 530 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
PRKDC-211ENST00000546304 PLCD1P51178 756 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 ALX1Q15699 326 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 SBK1Q52WX2 424 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 CTR9Q6PD62 1173 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 TTC6Q86TZ1 520 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 SVOPQ8N4V2 548 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
PRKDC-211ENST00000546304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
PRKDC-211ENST00000546304 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 ZNF341Q9BYN7 854 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 ANGEL1Q9UNK9 670 aaKnown RBP7.52□□□□□ -1.21
PRKDC-211ENST00000546304 FZD1Q9UP38 647 aa7.52□□□□□ -1.21
PRKDC-211ENST00000546304 RBM19Q9Y4C8 960 aaKnown RBP7.52□□□□□ -1.21
PRKDC-211ENST00000546304 TMEM88BA6NKF7 163 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 MINDY4BA8MYZ0 360 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 SMIM22K7EJ46 135 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 ARHGEF15O94989 841 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 REC8O95072 547 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 NOS2P35228 1153 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 IREB2P48200 963 aaKnown RBP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 C1QTNF8P60827 252 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 GABPAQ06546 454 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 PPARAQ07869 468 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 PRKG1Q13976 671 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 C12orf60Q5U649 245 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 CST9Q5W186 159 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 C16orf86Q6ZW13 317 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 MOB2Q70IA6 237 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 MIGA2Q7L4E1 593 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 ARMC9Q7Z3E5 817 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 SLC44A5Q8NCS7 719 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
PRKDC-211ENST00000546304 LSG1Q9H089 658 aaKnown RBP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 ABT1Q9ULW3 272 aaKnown RBP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-211ENST00000546304 PLIN4Q96Q06 1357 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 A0A1W2PNR3 127 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 BNIP3LO60238 219 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 FGAP02671 866 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 SLC3A2P08195 630 aaKnown RBP7.5□□□□□ -1.21
PRKDC-211ENST00000546304 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-211ENST00000546304 INPP5BP32019 993 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 SHMT1P34896 483 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 MAP2K3P46734 347 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 HUNKP57058 714 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 HAND2P61296 217 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 MAP3K10Q02779 954 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 PTH1RQ03431 593 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 PTK7Q13308 1070 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 VGLL4Q14135 290 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 IMMTQ16891 758 aaKnown RBP7.5□□□□□ -1.21
PRKDC-211ENST00000546304 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-211ENST00000546304 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 SAPCD2Q86UD0 394 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms