RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MFAP3LO75121 409 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 IDH1O75874 414 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CHGBP05060 677 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 ERCC3P19447 782 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 KRT2P35908 639 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 FOXC1Q12948 553 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CUL4BQ13620 913 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 SCARF1Q14162 830 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 PARP10Q53GL7 1025 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CCDC178Q5BJE1 867 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 IQCEQ6IPM2 695 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 WDR93Q6P2C0 686 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CTR9Q6PD62 1173 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CYP26C1Q6V0L0 522 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 TRIM50Q86XT4 487 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 FOXP4Q8IVH2 680 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 PDILTQ8N807 584 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 FANCBQ8NB91 859 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CCDC12Q8WUD4 166 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 DPF2Q92785 391 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 CDC5LQ99459 802 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 UBAC1Q9BSL1 405 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 FUT8Q9BYC5 575 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 PARD6BQ9BYG5 372 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 ZNHIT6Q9NWK9 470 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 ADD3Q9UEY8 706 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 RWDD2AQ9UIY3 292 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 COL5A2P05997 1499 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 BCL9LQ86UU0 1499 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 PDS5AQ29RF7 1337 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 SYNRGQ9UMZ2 1314 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 A0A0G2JLW4 131 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 TARSL2A2RTX5 802 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CTAGE15A4D2H0 777 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 H7C1D1 291 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 IRS4O14654 1257 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 WFS1O76024 890 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 FGRP09769 529 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CTAGE8P0CG41 777 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 BMP6P22004 513 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CALML3P27482 149 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 IL6STP40189 918 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 TOB1P50616 345 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CLDN10P78369 228 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CKAP4Q07065 602 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ORC2Q13416 577 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 EML3Q32P44 896 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 HSP90B2PQ58FF3 399 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 GALNT17Q6IS24 598 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 DNAJC14Q6Y2X3 702 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ARHGAP27Q6ZUM4 889 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 TOM1L2Q6ZVM7 507 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 APTXQ7Z2E3 356 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CTAGE6Q86UF2 777 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CTAGE4Q8IX94 777 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 LARGE2Q8N3Y3 721 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 OGFOD1Q8N543 542 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 IGSF22Q8N9C0 903 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 SPATA5Q8NB90 893 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 FAM71BQ8TC56 605 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CLIC6Q96NY7 704 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 NAPGQ99747 312 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ARHGAP9Q9BRR9 750 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 NUP58Q9BVL2 599 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 FAM107BQ9H098 131 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 CUEDC2Q9H467 287 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 HAUS4Q9H6D7 363 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 PIH1D3Q9NQM4 214 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 PRDM11Q9NQV5 511 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 SH3GLB2Q9NR46 395 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 GNL3LQ9NVN8 582 aaKnown RBP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 TOR4AQ9NXH8 423 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ZSWIM5Q9P217 1185 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 STK17AQ9UEE5 414 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.29□□□□□ -1.24
SNHG1-225ENST00000545920 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 ARAP2Q8WZ64 1704 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 MYH7P12883 1935 aa7.29□□□□□ -1.24
SNHG1-225ENST00000545920 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 ANO9A1A5B4 782 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 GSG1L2A8MUP6 293 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 TMEM232C9JQI7 657 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 LAD1O00515 517 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 ATP2B4P23634 1241 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 EEF1GP26641 437 aaKnown RBP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 OAS2P29728 719 aaKnown RBP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 LONP1P36776 959 aaKnown RBP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 TDO2P48775 406 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 KRT83P78385 493 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 ATP2C1P98194 919 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 ITIH3Q06033 890 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 FMR1Q06787 632 aaKnown RBP eCLIP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 PDE4BQ07343 736 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 DPYDQ12882 1025 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms