RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 ZBED3Q96IU2 234 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 TIGD1Q96MW7 591 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 RBSNQ9H1K0 784 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 RIOX1Q9H6W3 641 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 TDRD3Q9H7E2 651 aaKnown RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 KANSL2Q9H9L4 492 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 BARHL2Q9NY43 387 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 NYAP2Q9P242 653 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 PCDHA4Q9UN74 947 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 PCDHAC2Q9Y5I4 1007 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CNTNAP1P78357 1384 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 hCG_1642624A0A1W2PR95 340 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 USP17L5A8MUK1 530 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 MPHOSPH10O00566 681 aaKnown RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ADH1BP00325 375 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 PFKFB1P16118 471 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 GNA11P29992 359 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 TOB1P50616 345 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ZNF280AP59817 542 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ICA1Q05084 483 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 TYRO3Q06418 890 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 CXCL9Q07325 125 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ZNF543Q08ER8 600 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ORC2Q13416 577 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 STX1AQ16623 288 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ABCB5Q2M3G0 1257 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 SLC35G1Q2M3R5 365 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 Q3C1V9 767 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 TPRNQ4KMQ1 711 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 TTC38Q5R3I4 469 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 USP17L2Q6R6M4 530 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ZFPM1Q8IX07 1006 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 BLIDQ8IZY5 108 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 LRRC47Q8N1G4 583 aaKnown RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 GMCL1P1Q8NEA9 526 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 MKL1Q969V6 931 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 FERMT2Q96AC1 680 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 PRMT6Q96LA8 375 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 CSRNP1Q96S65 589 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 PANK2Q9BZ23 570 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ZMYND12Q9H0C1 365 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 CABP5Q9NP86 173 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 ZNF70Q9UC06 446 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 CLIP2Q9UDT6 1046 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 FBXO2Q9UK22 296 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 SRPRBQ9Y5M8 271 aaKnown RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 DICER1Q9UPY3 1922 aaKnown RBP6.24□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC194A0A1B0GVG4 234 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 A0A1B0GVL5 298 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 M0R2N6 131 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 FZD9O00144 591 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 MARCKSP29966 332 aaPredicted RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 SYKP43405 635 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 TNNI2P48788 182 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 NDUFA8P51970 172 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 NAPAP54920 295 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 EIF6P56537 245 aaKnown RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 ATP2C1P98194 919 aaPredicted RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 TNFAIP1Q13829 316 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 CAMK4Q16566 473 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 SHC4Q6S5L8 630 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 SASS6Q6UVJ0 657 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 KRT25Q7Z3Z0 450 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 CLEC10AQ8IUN9 316 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM200AQ8TCP9 573 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 DPF2Q92785 391 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 GPKOWQ92917 476 aaPredicted RBP eCLIP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 MTMR8Q96EF0 704 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC34Q96HJ3 373 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 PDLIM2Q96JY6 352 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 PPP1R9BQ96SB3 815 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 PYM1Q9BRP8 204 aaKnown RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 C6orf50Q9HD87 102 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 MYOZ2Q9NPC6 264 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM13BQ9NYF5 915 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 PPP1R1BQ9UD71 204 aaPredicted RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 MTMR7Q9Y216 660 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 BCS1LQ9Y276 419 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 PCDHB6Q9Y5E3 794 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 MRVI1Q9Y6F6 885 aa6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
NPIPB3-214ENST00000545358 ATAD5Q96QE3 1844 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 PNMA6FA0A0J9YX94 578 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 TCP10L2B9ZVM9 353 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 LAD1O00515 517 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 WNT10BO00744 389 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 ZNF202O95125 648 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 GOLGA8HP0CJ92 632 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 EEF2P13639 858 aaKnown RBP6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SLC1A4P43007 532 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 RASSF7Q02833 373 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SEPT2Q15019 361 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 PUS10Q3MIT2 529 aaKnown RBP6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 EARS2Q5JPH6 523 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms