RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SPEGQ15772 3267 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 FRYLO94915 3013 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 IGHA2P01877 340 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 IL1R1P14778 569 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 RAB15P59190 212 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 EP300Q09472 2414 aaPredicted RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 PTPRFP10586 1907 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 BPTFQ12830 3046 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 CEP250Q9BV73 2442 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 ARHGEF15O94989 841 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 SDHBP21912 280 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 CRKP46108 304 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 ATXN1P54253 815 aaKnown RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 AIMP1Q12904 312 aaKnown RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 ANO1Q5XXA6 986 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 LRSAM1Q6UWE0 723 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 FBXO33Q7Z6M2 555 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 ASB16Q96NS5 453 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 PRKRIP1Q9H875 184 aaPredicted RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.53□□□□□ -1.048e-8■□□□□ 11.2
LDHA-223ENST00000545215 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
LDHA-223ENST00000545215 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
LDHA-223ENST00000545215 ZZEF1O43149 2961 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 TRIM75PA6NK02 468 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 SEPT4O43236 478 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 LMNAP02545 664 aaKnown RBP8.52□□□□□ -1.05
LDHA-223ENST00000545215 MAPK1P28482 360 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 CYP2C19P33261 490 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 WNT7BP56706 349 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 SKOR1P84550 965 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 MTMR3Q13615 1198 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 SMAD2Q15796 467 aaKnown RBP8.52□□□□□ -1.05
LDHA-223ENST00000545215 VASH1Q7L8A9 365 aaPredicted RBP8.52□□□□□ -1.05
LDHA-223ENST00000545215 PLEKHH3Q7Z736 793 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 RTF1Q92541 710 aaKnown RBP8.52□□□□□ -1.05
LDHA-223ENST00000545215 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
LDHA-223ENST00000545215 SPTBN2O15020 2390 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 ZBTB24O43167 697 aaPredicted RBP8.51□□□□□ -1.05
LDHA-223ENST00000545215 PEX10O60683 326 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 ANXA1P04083 346 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 NPR3P17342 541 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.051e-323■■■■■ 38.8
LDHA-223ENST00000545215 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 CDC5LQ99459 802 aaKnown RBP8.51□□□□□ -1.05
LDHA-223ENST00000545215 SEMA4AQ9H3S1 761 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 TXNRD2Q9NNW7 524 aa8.51□□□□□ -1.05
LDHA-223ENST00000545215 COL4A4P53420 1690 aaPredicted RBP8.5□□□□□ -1.05
LDHA-223ENST00000545215 PDE8AO60658 829 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 HOXC6P09630 235 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 EPHA4P54764 986 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
LDHA-223ENST00000545215 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 C15orf52Q6ZUT6 534 aaKnown RBP8.5□□□□□ -1.05
LDHA-223ENST00000545215 KCNG4Q8TDN1 519 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 GDPD5Q8WTR4 605 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 PORCNQ9H237 461 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 TMOD2Q9NZR1 351 aa8.5□□□□□ -1.05
LDHA-223ENST00000545215 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 VAMP1P23763 118 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 PPP2R1AP30153 589 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 CYP2C18P33260 490 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 GDF10P55107 478 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
LDHA-223ENST00000545215 COL19A1Q14993 1142 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 FAM47AQ5JRC9 791 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 MFSD14BQ5SR56 506 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 SPRED2Q7Z698 418 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 CCAR1Q8IX12 1150 aaKnown RBP8.49□□□□□ -1.05
LDHA-223ENST00000545215 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
LDHA-223ENST00000545215 FAM151AQ8WW52 585 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 ANKRD2Q9GZV1 360 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 DBF4Q9UBU7 674 aaPredicted RBP8.49□□□□□ -1.05
LDHA-223ENST00000545215 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
LDHA-223ENST00000545215 FRYQ5TBA9 3013 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 TNKSO95271 1327 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 MROH7Q68CQ1 1323 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 A0A1B0GUL7 405 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 CCER2I3L3R5 266 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 BACH1O14867 736 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 HTATSF1O43719 755 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms