RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 HMGB1P09429 215 aaKnown RBP25.36■■□□□ 1.65
OTUB1-212ENST00000543988 SGMS1Q86VZ5 419 aa25.36■■□□□ 1.65
OTUB1-212ENST00000543988 RAB11FIP4Q86YS3 637 aa25.36■■□□□ 1.65
OTUB1-212ENST00000543988 FAM133AQ8N9E0 248 aa25.36■■□□□ 1.65
OTUB1-212ENST00000543988 RXRAP19793 462 aa25.35■■□□□ 1.65
OTUB1-212ENST00000543988 PRAMEF19Q5SWL8 479 aa25.35■■□□□ 1.65
OTUB1-212ENST00000543988 ZNF467Q7Z7K2 595 aaPredicted RBP25.35■■□□□ 1.65
OTUB1-212ENST00000543988 CTCFLQ8NI51 663 aaPredicted RBP25.35■■□□□ 1.65
OTUB1-212ENST00000543988 MTMR8Q96EF0 704 aa25.35■■□□□ 1.65
OTUB1-212ENST00000543988 MAP3K14Q99558 947 aa25.35■■□□□ 1.65
OTUB1-212ENST00000543988 SLC12A7Q9Y666 1083 aa25.35■■□□□ 1.65
OTUB1-212ENST00000543988 CYTH3O43739 400 aa25.34■■□□□ 1.65
OTUB1-212ENST00000543988 TFRCP02786 760 aaKnown RBP25.34■■□□□ 1.65
OTUB1-212ENST00000543988 RIOX1Q9H6W3 641 aa25.34■■□□□ 1.65
OTUB1-212ENST00000543988 ASTN1O14525 1302 aa25.34■■□□□ 1.65
OTUB1-212ENST00000543988 SOWAHBA6NEL2 793 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 PPP1R11O60927 126 aaPredicted RBP25.33■■□□□ 1.65
OTUB1-212ENST00000543988 CNGA1P29973 690 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 KIF5BP33176 963 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 BAATQ14032 418 aaPredicted RBP25.33■■□□□ 1.65
OTUB1-212ENST00000543988 LHX8Q68G74 356 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 MAMDC4Q6UXC1 1216 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 SLC30A10Q6XR72 485 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 MICU3Q86XE3 530 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 FBXO11Q86XK2 927 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 HOMER1Q86YM7 354 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 CCDC144CPQ8IYA2 1237 aa25.33■■□□□ 1.65
OTUB1-212ENST00000543988 MSL3Q8N5Y2 521 aaKnown RBP25.33■■□□□ 1.65
OTUB1-212ENST00000543988 ABCB11O95342 1321 aa25.33■■□□□ 1.64
OTUB1-212ENST00000543988 SYNGAP1Q96PV0 1343 aa25.33■■□□□ 1.64
OTUB1-212ENST00000543988 ZBTB5O15062 677 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 FARP2O94887 1054 aaPredicted RBP25.32■■□□□ 1.64
OTUB1-212ENST00000543988 PLEKHA8P1O95397 391 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 SNAI1O95863 264 aaPredicted RBP25.32■■□□□ 1.64
OTUB1-212ENST00000543988 APOA5Q6Q788 366 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 BLOC1S2Q6QNY1 142 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 UBE2Q1Q7Z7E8 422 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 PURBQ96QR8 312 aaKnown RBP25.32■■□□□ 1.64
OTUB1-212ENST00000543988 PIGSQ96S52 555 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 DDX20Q9UHI6 824 aaKnown RBP25.32■■□□□ 1.64
OTUB1-212ENST00000543988 NRBP1Q9UHY1 535 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 BRPF3Q9ULD4 1205 aa25.32■■□□□ 1.64
OTUB1-212ENST00000543988 PTPDC1A2A3K4 754 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 CALM1P0DP23 149 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 CALM2P0DP24 149 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 CALM3P0DP25 149 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 RPS6KB1P23443 525 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 OGDHLQ9ULD0 1010 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 CNPY2Q9Y2B0 182 aa25.31■■□□□ 1.64
OTUB1-212ENST00000543988 SEPT4O43236 478 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 CASTP20810 708 aaKnown RBP25.3■■□□□ 1.64
OTUB1-212ENST00000543988 PSMA5P28066 241 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 RNF207Q6ZRF8 634 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 ARMCX2Q7L311 632 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 SPZ1Q9BXG8 430 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 AMNQ9BXJ7 453 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.3■■□□□ 1.64
OTUB1-212ENST00000543988 DDX49Q9Y6V7 483 aaKnown RBP25.3■■□□□ 1.64
OTUB1-212ENST00000543988 MKI67P46013 3256 aaKnown RBP25.3■■□□□ 1.64
OTUB1-212ENST00000543988 PLXNA1Q9UIW2 1896 aa25.3■■□□□ 1.64
OTUB1-212ENST00000543988 ZNFX1Q9P2E3 1918 aaKnown RBP25.29■■□□□ 1.64
OTUB1-212ENST00000543988 ZNF865P0CJ78 1059 aaPredicted RBP25.29■■□□□ 1.64
OTUB1-212ENST00000543988 CALML3P27482 149 aa25.29■■□□□ 1.64
OTUB1-212ENST00000543988 GNAQP50148 359 aa25.29■■□□□ 1.64
OTUB1-212ENST00000543988 RPS6P62753 249 aaKnown RBP25.29■■□□□ 1.64
OTUB1-212ENST00000543988 PIBF1Q8WXW3 757 aa25.29■■□□□ 1.64
OTUB1-212ENST00000543988 LZTS2Q9BRK4 669 aa25.29■■□□□ 1.64
OTUB1-212ENST00000543988 SMCHD1A6NHR9 2005 aa25.29■■□□□ 1.64
OTUB1-212ENST00000543988 KLF18A0A0U1RQI7 1052 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 MSCO60682 206 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 CAPN2P17655 700 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 MNX1P50219 401 aaPredicted RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 FGD1P98174 961 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 ANO1Q5XXA6 986 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 SYNE3Q6ZMZ3 975 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 Q6ZUG5 572 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 TMTC3Q6ZXV5 915 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 CMTR1Q8N1G2 835 aaKnown RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 SRBD1Q8N5C6 995 aaKnown RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 FANCBQ8NB91 859 aa25.28■■□□□ 1.64
OTUB1-212ENST00000543988 DIS3LQ8TF46 1054 aaKnown RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 ZHX1Q9UKY1 873 aaPredicted RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 MRPL11Q9Y3B7 192 aaKnown RBP25.28■■□□□ 1.64
OTUB1-212ENST00000543988 PNMA6FA0A0J9YX94 578 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 OPLAHO14841 1288 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 ZBTB43O43298 467 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 ANKLE1Q8NAG6 615 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 RGS22Q8NE09 1264 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 TBC1D5Q92609 795 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 PCDHA1Q9Y5I3 950 aa25.27■■□□□ 1.64
OTUB1-212ENST00000543988 ASB14A6NK59 587 aa25.26■■□□□ 1.63
OTUB1-212ENST00000543988 APOBRQ0VD83 1088 aa25.26■■□□□ 1.63
OTUB1-212ENST00000543988 BRF1Q92994 677 aa25.26■■□□□ 1.63
OTUB1-212ENST00000543988 LENG1Q96BZ8 264 aaPredicted RBP25.26■■□□□ 1.63
OTUB1-212ENST00000543988 KATNBL1Q9H079 304 aa25.26■■□□□ 1.63
OTUB1-212ENST00000543988 ZSWIM6Q9HCJ5 1215 aa25.26■■□□□ 1.63
OTUB1-212ENST00000543988 GOLGA8AA7E2F4 631 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 SMARCA1P28370 1054 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 ALDH5A1P51649 535 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms