RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SEC63Q9UGP8 760 aaKnown RBP15.78■□□□□ 0.12
SP140-213ENST00000543928 TRIM17Q9Y577 477 aa15.78■□□□□ 0.12
SP140-213ENST00000543928 IVNS1ABPQ9Y6Y0 642 aa15.78■□□□□ 0.12
SP140-213ENST00000543928 PPFIA3O75145 1194 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 CD2BP2O95400 341 aaKnown RBP15.77■□□□□ 0.12
SP140-213ENST00000543928 GNRH1P01148 92 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 IFNAR1P17181 557 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 PTPREP23469 700 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 MUM1L1Q5H9M0 696 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 CPLX2Q6PUV4 134 aaKnown RBP15.77■□□□□ 0.12
SP140-213ENST00000543928 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 PHKBQ93100 1093 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 GTF3C6Q969F1 213 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 ZSCAN31Q96LW9 406 aaPredicted RBP15.77■□□□□ 0.12
SP140-213ENST00000543928 ACAD9Q9H845 621 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 FBXO40Q9UH90 709 aa15.77■□□□□ 0.12
SP140-213ENST00000543928 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
SP140-213ENST00000543928 ABCB11O95342 1321 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 STRNO43815 780 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 FCER1AP12319 257 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 HOXD10P28358 340 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 CTU1Q7Z7A3 348 aaKnown RBP15.76■□□□□ 0.11
SP140-213ENST00000543928 MMP19Q99542 508 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 SRRDQ9UH36 339 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 PCDHA1Q9Y5I3 950 aa15.76■□□□□ 0.11
SP140-213ENST00000543928 SLC15A5A6NIM6 579 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 NFIBO00712 420 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
SP140-213ENST00000543928 MCM2P49736 904 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
SP140-213ENST00000543928 PRKCZQ05513 592 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 TRAF1Q13077 416 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 GRB14Q14449 540 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 KCTD2Q14681 263 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 MORN1Q5T089 497 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 ABRAQ8N0Z2 381 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 SOCS4Q8WXH5 440 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 CLEC4DQ8WXI8 215 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 NUDT12Q9BQG2 462 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 SLC26A6Q9BXS9 759 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 RNF26Q9BY78 433 aaPredicted RBP15.75■□□□□ 0.11
SP140-213ENST00000543928 SH2B1Q9NRF2 756 aaPredicted RBP15.75■□□□□ 0.11
SP140-213ENST00000543928 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 GABRQQ9UN88 632 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 MRPL11Q9Y3B7 192 aaKnown RBP15.75■□□□□ 0.11
SP140-213ENST00000543928 PLXNB2O15031 1838 aa15.75■□□□□ 0.11
SP140-213ENST00000543928 CDKL5O76039 1030 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 ADORA2AP29274 412 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 FLT3LGP49771 235 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 SSRP1Q08945 709 aaKnown RBP15.74■□□□□ 0.11
SP140-213ENST00000543928 ST3GAL1Q11201 340 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.74■□□□□ 0.11
SP140-213ENST00000543928 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 TRIM22Q8IYM9 498 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 ANKRD35Q8N283 1001 aa15.74■□□□□ 0.11
SP140-213ENST00000543928 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
SP140-213ENST00000543928 A1CFQ9NQ94 594 aaKnown RBP15.74■□□□□ 0.11
SP140-213ENST00000543928 RBM27Q9P2N5 1060 aaKnown RBP15.74■□□□□ 0.11
SP140-213ENST00000543928 DTNBO60941 627 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 PGK2P07205 417 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 RGS2P41220 211 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 PRMT2P55345 433 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 MAP2K5Q13163 448 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
SP140-213ENST00000543928 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 USP6NLQ92738 828 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 PTPN22Q9Y2R2 807 aa15.73■□□□□ 0.11
SP140-213ENST00000543928 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
SP140-213ENST00000543928 COBLO75128 1261 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 SCG2P13521 617 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 CYP2B6P20813 491 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 PKN1Q16512 942 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 DPP9Q86TI2 863 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
SP140-213ENST00000543928 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
SP140-213ENST00000543928 PFASO15067 1338 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 OPLAHO14841 1288 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 DEXIO95424 95 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 NAPAP54920 295 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 BAATQ14032 418 aaPredicted RBP15.71■□□□□ 0.11
SP140-213ENST00000543928 RNF207Q6ZRF8 634 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 MCF2L2Q86YR7 1114 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
SP140-213ENST00000543928 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 RAET1EQ8TD07 263 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 APBA2Q99767 749 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 CYP39A1Q9NYL5 469 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 PTCH2Q9Y6C5 1203 aa15.71■□□□□ 0.11
SP140-213ENST00000543928 STK36Q9NRP7 1315 aa15.7■□□□□ 0.1
SP140-213ENST00000543928 DNAJC25-GNG10A0A024R161 153 aa15.7■□□□□ 0.1
SP140-213ENST00000543928 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
SP140-213ENST00000543928 STXBP3O00186 592 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms