RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ELNP15502 786 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 SMARCA1P28370 1054 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 PDIA3P30101 505 aaKnown RBP17.52■□□□□ 0.4
CD9-210ENST00000543916 RGS2P41220 211 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 NEK4P51957 841 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 AK2P54819 239 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 KCTD2Q14681 263 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 FBXO11Q86XK2 927 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 NPLOC4Q8TAT6 608 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 APBA2Q99767 749 aa17.52■□□□□ 0.4
CD9-210ENST00000543916 NFIBO00712 420 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 PGK2P07205 417 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 HOXC6P09630 235 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
CD9-210ENST00000543916 GRK4P32298 578 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 ADD1P35611 737 aaKnown RBP17.51■□□□□ 0.39
CD9-210ENST00000543916 FUT2Q10981 343 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 CCL14Q16627 93 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
CD9-210ENST00000543916 A1CFQ9NQ94 594 aaKnown RBP17.51■□□□□ 0.39
CD9-210ENST00000543916 ABCB11O95342 1321 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 PNMA6FA0A0J9YX94 578 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
CD9-210ENST00000543916 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 DPP9Q86TI2 863 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 ANKRD35Q8N283 1001 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 SLAIN1Q8ND83 568 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 PXYLP1Q8TE99 480 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 TRIB2Q92519 343 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
CD9-210ENST00000543916 AMNQ9BXJ7 453 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
CD9-210ENST00000543916 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 TPCN1Q9ULQ1 816 aa17.5■□□□□ 0.39
CD9-210ENST00000543916 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 STK3Q13188 491 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
CD9-210ENST00000543916 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
CD9-210ENST00000543916 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 ABHD8Q96I13 439 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
CD9-210ENST00000543916 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 OPLAHO14841 1288 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 TRIM32Q13049 653 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 NSMFQ6X4W1 530 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 ARMC5Q96C12 935 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 MAML3Q96JK9 1138 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 FGD4Q96M96 766 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 PCDHA1Q9Y5I3 950 aa17.48■□□□□ 0.39
CD9-210ENST00000543916 PFASO15067 1338 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 LARGE1O95461 756 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 IGHA2P01877 340 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 INHAP05111 366 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 CNTN2Q02246 1040 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 NTRK3Q16288 839 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 SEC63Q9UGP8 760 aaKnown RBP17.47■□□□□ 0.39
CD9-210ENST00000543916 MRPL11Q9Y3B7 192 aaKnown RBP17.47■□□□□ 0.39
CD9-210ENST00000543916 CENPFP49454 3210 aa17.47■□□□□ 0.39
CD9-210ENST00000543916 HMGCRP04035 888 aa17.46■□□□□ 0.39
CD9-210ENST00000543916 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
CD9-210ENST00000543916 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.39
CD9-210ENST00000543916 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
CD9-210ENST00000543916 TBC1D5Q92609 795 aa17.46■□□□□ 0.39
CD9-210ENST00000543916 PURBQ96QR8 312 aaKnown RBP17.46■□□□□ 0.39
CD9-210ENST00000543916 SLC5A4Q9NY91 659 aa17.46■□□□□ 0.39
CD9-210ENST00000543916 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
CD9-210ENST00000543916 DIS3Q9Y2L1 958 aaKnown RBP17.46■□□□□ 0.39
CD9-210ENST00000543916 ASTN1O14525 1302 aa17.46■□□□□ 0.38
CD9-210ENST00000543916 PTPDC1A2A3K4 754 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 SOWAHBA6NEL2 793 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 PFKFB2O60825 505 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 PPFIA3O75145 1194 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 RPS6P62753 249 aaKnown RBP17.45■□□□□ 0.38
CD9-210ENST00000543916 SCRN1Q12765 414 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 RABEP1Q15276 862 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 GPKOWQ92917 476 aaPredicted RBP eCLIP17.45■□□□□ 0.38
CD9-210ENST00000543916 PHKBQ93100 1093 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
CD9-210ENST00000543916 MCM3APO60318 1980 aa17.45■□□□□ 0.38
CD9-210ENST00000543916 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
CD9-210ENST00000543916 IFNAR1P17181 557 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 CALML3P27482 149 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 CYP2C19P33261 490 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
CD9-210ENST00000543916 TRAF1Q13077 416 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms