RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 A0A1W2PQ45 241 aaPredicted RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 A0A1W2PQY0 241 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 ERICH2A1L162 156 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 TLR3O15455 904 aaKnown RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 DHX16O60231 1041 aaKnown RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 KDM4AO75164 1064 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 NOVP48745 357 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 ACLYP53396 1101 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 IRX6P78412 446 aaPredicted RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 CNTN2Q02246 1040 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 TRIM60Q495X7 471 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 MUM1L1Q5H9M0 696 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 TTBK2Q6IQ55 1244 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 GPR153Q6NV75 609 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 ZSCAN10Q96SZ4 725 aaPredicted RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 RANBP17Q9H2T7 1088 aaKnown RBP8.39□□□□□ -1.07
NUP43-206ENST00000543637 TMEM39AQ9NV64 488 aa8.39□□□□□ -1.07
NUP43-206ENST00000543637 CENPFP49454 3210 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 ELP1O95163 1332 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 SYNRGQ9UMZ2 1314 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 LOC102724159A0A0B4J2E5 919 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 B4E1Z4 1266 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
NUP43-206ENST00000543637 ADAMTS4O75173 837 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 ASGR1P07306 291 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 CLTBP09497 229 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 PDHBP11177 359 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 GJA9P57773 515 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 TLE2Q04725 743 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 PDE4DQ08499 809 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 ZNF543Q08ER8 600 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 PWP2Q15269 919 aaKnown RBP8.38□□□□□ -1.07
NUP43-206ENST00000543637 TTC22Q5TAA0 569 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 RNF207Q6ZRF8 634 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 KIAA1211Q6ZU35 1233 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 FAM133AQ8N9E0 248 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 BADQ92934 168 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 CYP39A1Q9NYL5 469 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 Q9Y3F1 56 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 HTTP42858 3142 aa8.38□□□□□ -1.07
NUP43-206ENST00000543637 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 A0A0U1RQG5 324 aaPredicted RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 PQBP1O60828 265 aaKnown RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 CABYRO75952 493 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 PARP1P09874 1014 aaKnown RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 CALML3P27482 149 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 CST5P28325 142 aaPredicted RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 TRAF1Q13077 416 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 BAATQ14032 418 aaPredicted RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 SART3Q15020 963 aaKnown RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 SNX17Q15036 470 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 IFIT1BQ5T764 474 aaKnown RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 EEPD1Q7L9B9 569 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 RALYLQ86SE5 291 aaKnown RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 MCF2L2Q86YR7 1114 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 TBC1D10CQ8IV04 446 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 KLHDC9Q8NEP7 349 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 DNERQ8NFT8 737 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 LRCH3Q96II8 777 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 TOX2Q96NM4 488 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 SEZ6LQ9BYH1 1024 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 UBA5Q9GZZ9 404 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 MAF1Q9H063 256 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 VTA1Q9NP79 307 aa8.37□□□□□ -1.07
NUP43-206ENST00000543637 GPHNQ9NQX3 736 aaPredicted RBP8.37□□□□□ -1.07
NUP43-206ENST00000543637 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 ABCB11O95342 1321 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 NEDD4P46934 1319 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 RAD50Q92878 1312 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 ARVCFO00192 962 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 GOLGA8HP0CJ92 632 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 SNHG28P0DPA3 235 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 ALDH5A1P51649 535 aaPredicted RBP8.36□□□□□ -1.07
NUP43-206ENST00000543637 USH1GQ495M9 461 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 ANKRD33Q7Z3H0 272 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 TLK2Q86UE8 772 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 TMEM199Q8N511 208 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 DEFB123Q8N688 67 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 RGS22Q8NE09 1264 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 ANKS1AQ92625 1134 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
NUP43-206ENST00000543637 UPF3AQ9H1J1 476 aaKnown RBP8.36□□□□□ -1.07
NUP43-206ENST00000543637 PDLIM7Q9NR12 457 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
NUP43-206ENST00000543637 MRPL11Q9Y3B7 192 aaKnown RBP8.36□□□□□ -1.07
NUP43-206ENST00000543637 TNKSO95271 1327 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 WDR19Q8NEZ3 1342 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 KIAA1217Q5T5P2 1943 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms